Conserved Protein Domain Family
pRha

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COG3646: pRha (this model, PSSM-Id:226172 is obsolete and has been replaced by 442863)
Phage regulatory protein Rha [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 226172
Aligned: 10 rows
Threshold Bit Score: 129.907
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15672020   5 TVSLDVIIKNKN---------------------VIVSSLSVAKAFDRQHSHILRSIEDIKRDWDsliqsknglnrniipl 63  Lactococcus lactis ...
9630225    2 ESYLTVIEQNGQ---------------------LLVDSREVAEMVGKRHTDLLRSIDGYVAIL----------------- 43  Bacteriophage SPBc2
9633432    1 mtMNELINSNA----------------------IKMTSIEIAELVGSRHDKVKQSIERLAVRGVi--------------- 43  Bacteriophage VT2-Sa
1175786    7 ENFEQFLKVNDKq-------------------rIVTNSRHIATVFGKRHDNIIRDIKALVIEQD---------------- 51  Haemophilus influenzae
15673927   1 MKGLAFLTSPDLsk-----------------aeVVTNHVVIAEYAGIERKSVRRLINNHKNDF----------------- 46  Lactococcus lactis ...
15603639   3 NTNIQVNQANELqgaesavnnavfpkvfhketvAMTDSLKVAHYFGKRHDNLLNTIKNLGCSD----------------- 65  Pasteurella multocida
15901000   1 -MELVYMDGKKE---------------------PYTTSEIIAECAEVQHHTITRLIRENKADF----------------- 41  Streptococcus pneum...
9632502    1 MTMNELINSNA----------------------IKMTSIEIAELVGSQHGNVRISIERLAKRGVi--------------- 43  Bacteriophage 933W
16800806   1 MNNLAVLDKNN-----------------------TLNSREVAEMVEKRHSDLLRDIETYIRYIN---------------- 41  Listeria innocua
16800806   1 MNNLAVLDKNN-----------------------TLNSREVAEMVEKRHSDLLRDIETYIRYIN---------------- 41  Listeria innocua
15672020  64 ksqGNKQVIFTDYFKESE-YIAENGRLVKFFEMNRNGFMLLANSFNGKRILPIKLAFIERFDELEHITLEQAKETENRKN 142 Lactococcus lactis ...
9630225   44 ---LNAKLRSVEFFLEST-YKDATGRSLKHFHLTRKGCDMVANKMTGAKGVLFTAQYVSKFEEMEKALKARPSLIDTYLD 119 Bacteriophage SPBc2
9633432   44 ---RNPPMVVFEKINNLG-LLRGVEAYVFEGEQGKRDSIIVVAQLS----PEFTARLVDRWRELEGATAkipqtfsealr 115 Bacteriophage VT2-Sa
1175786   52 -----CGEFALLNFEETS-YFDEWGRKQPMYQMTKNGFLLLVMGYRTQKAMKFKVEFIKAFDFMREKLQQEG--YSLMHK 123 Haemophilus influenzae
15673927  47 -----ENFGRLRFEITTLpDSRGQKVKIYQLNRNQAMLMITYLDNT-EVVRNFKIALVKRFDEMEKELYARKFARAVEKP 120 Lactococcus lactis ...
15603639  66 -------EFRLLNFKESY-YLNEQNKKQPMFYMTQDGFTLLVMGFTGKKAMQFKEQYIKEFNEMKKRLATRANMKADQIR 137 Pasteurella multocida
15901000  42 -----EELGILGFKIHKL-DTRGQPKKSYILNEQQATFLITYLKNT-ETVRQFKLNLVKAFFEMREELSEIRLQRALEKP 114 Streptococcus pneum...
9632502   44 ---QLPSMQKVENKQTIS-PNKFTSVYIFEGEQGKRGSIIVVAQLS----PEFTARLVDRWRELEGATAkipqtfsealr 115 Bacteriophage 933W
16800806  42 ---QNAKLRSDDFFSEST-YQAGTGKDYKCYEITKMGCEMIANKLTGAKGIQFTALFVQKFNKLEEkemqtfyipgtyae 117 Listeria innocua
16800806  42 ---QNAKLRSDDFFSEST-YQAGTGKDYKCYEITKMGCEMIANKLTGAKGIQFTALFVQKFNKLEEkemqtfyipgtyae 117 Listeria innocua
15672020 143 LNQAIKESPHFKPFYYSRF---SDFLCQLITHNKYKTVKKLREDKGYYGKQ 190 Lactococcus lactis subsp. lactis
9630225  120 MNEDEraiayfterkakrelqeqltlaepkvekydrflntdglmkigqvak 170 Bacteriophage SPBc2
9633432  116 laadledqkaelekqlalaapkvefadrvgeasgilignfakvvgigpnkl 166 Bacteriophage VT2-Sa
1175786  124 YNELCIEHKAKKAFASLCG---KGLREWKGDKPVLEATLKLFEDKMQIELP 171 Haemophilus influenzae
15673927 121 KGVTLHQAISEWNHYPRHGniwHTIIRSLLATTVTGLTKKQIQARDIDWRK 171 Lactococcus lactis subsp. lactis
15603639 138 MNEAIKYRLEQVGKEDPHA---YSRENNLVYVVALGNNRKSWLQVNGYPDD 185 Pasteurella multocida
15901000 115 KRKTLHDSIETWPNAPKHA---HSTMNNLLLKAVTDMNAKQLREERGGYNG 162 Streptococcus pneumoniae TIGR4
9632502  116 laadledqkaelekqlalaapkvefadrvgeasgilignfakvvgigpnkl 166 Bacteriophage 933W
16800806 118 altlaakqaelneqlmlenevktqtiaeyepkvsyydqilkspglitvtqi 168 Listeria innocua
16800806 118 altlaakqaelneqlmlenevktqtiaeyepkvsyydqilkspglitvtqi 168 Listeria innocua
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