Conserved Protein Domain Family
YbxI

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COG2602: YbxI (this model, PSSM-Id:225322 is obsolete and has been replaced by 442014)
Beta-lactamase class D [Defense mechanisms]
Statistics
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PSSM-Id: 225322
Aligned: 12 rows
Threshold Bit Score: 300.822
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16331890  29 SNRLHTPQIAQRPKISNSTTLdnrslgsverqersdwASFFDGAeaQGTIVVLDQRggAHQLWVYNQERADRAYSPASTF 108 Synechocystis sp. P...
15888272  16 RLPAIVLSCLALPGLLPLSAF----------------AQQQPQ---AFECTLVTSI--ETGAIINQQGACDQRVAPASTF 74  Agrobacterium tumef...
6648100   19 FSVHAASSAHEKHLNVSKMNV----------------DDEFKDT--DGTFILHDLQ--KDQTFVYNRKRANQRQTPQSTF 78  Bacillus subtilis
15791667   1 MKKITLFLLFLNLVFGQDKIL----------------NNWFKEYntSGTFVFYDGK----TWASNDFSRAMETFSPASTF 60  Campylobacter jejuni
15600707   7 SALLLLSGHTQASEWNDSQAV----------------DKLFGAAgvKGTFVLYDVQ--RQRYVGHDRERAETRFVPASTY 68  Pseudomonas aerugin...
15893166   1 -----------------------------------------------------------MPVSVQAQEMTKNILFIEDFV 21  Rickettsia conorii
15893167   1 ------------------------------------------------------------MKIIKQEGNCESRYAPCSTF 20  Rickettsia conorii
17548251   1 --MKNLRLSAAGALLAAMASF----------------AHAGPL------CTLVADA--ATGRPIVREGQCGERVTPASTF 54  Ralstonia solanacearum
126941   334 SAHVQQDKYETNVSYKKLNQL----------------APYFKGF--DGSFVLYNER--EQAYSIYNEPESKQRYSPNSTY 393
16119211 333 sltdynykkplqSDYQILDE-----------------SKNFGSN--SGSFVMYSMK--KDKYYIYNEKESRKRYSPDSTY 391 Staphylococcus aure...
17229972  28 RDMPGHSQEIQTPAIPVNVNL----------------GRSFNQLgiKGSILIYDRN--NKKFYEHNAARNSQSFLPASTF 89  Nostoc sp. PCC 7120
13471048   1 -------------------MR----------------AQSAPLG--DVQCTLIADA--ASGKVLYQDGTCDQPFSPASTF 41  Mesorhizobium loti
16331890 109 KIPHSLFALDAGVVRDEFQ-VFEWDGVERNF--APHNQDQTLRSAMRNSAVWVYEIFAAEIGEAKAREYLTQIDYGNVDS 185 Synechocystis sp. P...
15888272  75 KVPLALIGFDAGILQDGKTpAWDWKPGTEAR--ASDRKTVDPTIWEQDSVLWYSREITRRLGPEKFAAYVKRLGYGNADV 152 Agrobacterium tumef...
6648100   79 KVVNALIGLQVKAVRDEYD-VKRWDGVKREF--ESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDI 155 Bacillus subtilis
15791667  61 KIFNALIALDSGVIKTKKEiFYHYRGEKVFL--SSWAQDMNLSSAIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKI 138 Campylobacter jejuni
15600707  69 KVANSLIGLSTGAVRSADE-VLPYGGKPQRF--KAWEHDMSLRDAIKASNVPVYQELARRIGLERMRANVSRLGYGNAEI 145 Pseudomonas aerugin...
15893166  22 DCWKRYGKTGSGNKLSQDRtVKLKDRKIGWF--IGWLQKNDRTVFFVHFIENNKNYDSYAGQRSKEAAKEKLKELINQEL 99  Rickettsia conorii
15893167  21 KIAISLMGYDDGFLIDETHpKLPVKEGYADYl-EVWKQSQTPKDWMKNSCVWYSQIITKELGMEKFRDYVT--------- 90  Rickettsia conorii
17548251  55 KIALSLMGYDAGVLRDAHApTLAFKPGDPDWggEAWHAPTDPARWMQYSVVWYSQRITHALGAERFRSYVRQFDYGNQDV 134 Ralstonia solanacearum
126941   394 KIYLALMAFDQNLLSLNHT-EQQWDKHQYPF--KEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEEI 470
16119211 392 KIYLALFGLDRHIISDKNS-RMSWNHKHYLF--ESWNKEQDLNTAMQNSVNWYFERISNQIPKNYTAAQLKQLNYGNENL 468 Staphylococcus aure...
17229972  90 KIFNSLVALETGVISNDVA-ILTWDGMQRQF--PTWNQDTNIRQAFRNSTVWFYQVLARKIGHERMEKFIKQVGYGNLQI 166 Nostoc sp. PCC 7120
13471048  42 KVPLSLIGYDAGILSDEHTpSWDYKPEFNAA--KRDQKIVDPVIWEKDSVLWYSREITRKLGPESFAGYVSKLGYGNKDV 119 Mesorhizobium loti
16331890 186 STSKGa------YWIDGALTISAQEQIHFLQKLYQNELPFRIEHQRLVKDIIIVEAGRN-WILRAKTGWEGRW------- 251 Synechocystis sp. P...
15888272 153 SGEPGknnglthSWLGASLTISPVEQVGFLRRLLGGNLPFSRDAQAKTRAIMPVFDAPEsWAVHGKTGTGYMRdekgnp- 231 Agrobacterium tumef...
6648100  156 SGGId------qFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDH-YTLYGKTGTRLTDmg----- 223 Bacillus subtilis
15791667 139 SKIDT-------FWLDNSLKISAKEQAILLFRLSQNSLPFSQEAMNSVKEMIYLKNMEN-LELFGKTGFNDEQk------ 204 Campylobacter jejuni
15600707 146 GQVVDn------FWLVGPLKISAMEQTRFLLRLAQGELPFPAPVQSTVRAMTLLESGPG-WELHGKTGWCFDCtp----- 213 Pseudomonas aerugin...
15893166 100 K------------------------------------------------------------------------------- 100 Rickettsia conorii
15893167     --------------------------------------------------------------------------------     Rickettsia conorii
17548251 135 AGDPGhdngldrAWILSSLRISPEEQVGFLRRLVNRQLPVSAHAFDMTARLTEVARLPGgWVVHGKTGAGAPGtlspdgt 214 Ralstonia solanacearum
126941   471 SGNEn-------YWNESSLKISAIEQVNLLKNMKQHNMHFDNKAIEKVENSMTLKQKDT-YKYVGKTGTGIVNhke---- 538
16119211 469 GSYKs-------YWMEDSLKISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEK-YELYGKTGTGIVNgky---- 536 Staphylococcus aure...
17229972 167 GTPEQid----rFWLEGPLQITPKQQIEFLQRLHRKELPFSQRTLDLVQDIMIYERTPN-YVLRGKTGWAASVtp----- 236 Nostoc sp. PCC 7120
13471048 120 SGNPGkndglthSWVNSSLKITPVEQVDFLRKLLARKLPVSAKAYDLTSAIIPTFQAGG-WTVQGKTGSTRLAddadki- 197 Mesorhizobium loti
16331890 252 -------GWWVGWVEW-PTGPV-FFALNIDTpNRLDDLYKREAITRDILQSIDALPA 299 Synechocystis sp. PCC 6803
15888272 232 -drnrpfGWFVGWAER-EGQHI-VFARLRVS-DKPSNEPLGPAVRDAFLRDIPRLAV 284 Agrobacterium tumefaciens str. C58 (Cereon)
6648100  224 ------lGWFVGFIKT-EHGSY-VFVTNVD----DS-GTKAKNITVDILKKYGLITS 267 Bacillus subtilis
15791667 205 ------iAWIVGFVYLkDENKYkAFALNLDI-DKFEDLYKREKILEKYLDELVKKVK 254 Campylobacter jejuni
15600707 214 -----elGWWVGWVKR-NERLY-GFALNIDMpGGEADIGKRVELGKASLKALGILP- 262 Pseudomonas aeruginosa PA01
15893166     ---------------------------------------------------------     Rickettsia conorii
15893167     ---------------------------------------------------------     Rickettsia conorii
17548251 215 wdqahayGWFVGWVTN-GTKTY-VFAHLLQD-ARIEPRPAGVRAREAVLDRLPALLP 268 Ralstonia solanacearum
126941   539 -----anGWFVGYVET-KDNTY-YFATHLKG-EDNANGEKAQQISERILKEMELI-- 585
16119211 537 -----nnGWFVGYVIT-NHDKY-YFATHLS--DGNPSGKNAELISEKILKGMGVLND 584 Staphylococcus aureus subsp. aureus N315
17229972 237 -----niGWFVGYLEQ-NNNVY-FFATNIDIr-NNDDAAARIEVTRRSLKALGLL-- 283 Nostoc sp. PCC 7120
13471048 198 -sdkrslGWFVGWAKK-DGQQI-VFARLVVD-ATRTDMPKGLKTRAAFLKDLSLLVK 250 Mesorhizobium loti
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