5OAY


Conserved Protein Domain Family
Whib

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pfam02467: Whib (this model, PSSM-Id:396843 is obsolete and has been replaced by 426788)
Transcription factor WhiB
WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.
Statistics
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PSSM-Id: 396843
Aligned: 74 rows
Threshold Bit Score: 44.9416
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5OAY_A              13 WRHKAVCRDEDP----ELFFpvgns--gpalAQIADAKLVC-NRCPV--TTEC------LSWAL--NTGQDS------GV 69 
tigr:AAur_pTC10074  15 WWSAAACADEDP----DLFFpigtr--gparAQFEEARVIC-LSCPV--RTRC------LEYAM--KTGAEF------GM 71  Paenarthr...
WP_005112313       106 WRHDALCRGMPW----DFFYspddergarrrERERRALIIC-RGCRV--VAEC------RGYAL--ERREAF------GV 164 Mycobacte...
WP_014139940        17 WQLDGACRAADS----QLFFhpsgergqahdDRDRAAKAVC-ARCPV--RERC------LRHAL--ATRERY------GV 75  Kitasatos...
jgi:Ksed_07590      17 WQFEGLCRTTNP----EEFFhpegergsarrLRDERAKRVC-ERCPV--ILEC------REHAL--AAKEPY------GV 75  Kytococcu...
Q0RZI9             164 WRVRAACRGADL----SVFFspdgerrgardRREARARQIC-QVCPV--LVRC------RDHAL--TVGESY------GV 222 Rhodococc...
BAJ30562            27 WHTSAACRSDEA----GLFFapskeptaarlSREEHAKRVC-ARCPV--LLDC------REHAL--AQPEPY------GV 85  Kitasatos...
WP_023550815        17 WMERMACRNEDP----DLFSd---------eDREHEARTICiARCPV--RSTClarvktLESGL--HRDQRD------GV 73  Streptomy...
P71592              12 WFGYPDDDGSDGaakaRAYE-----------RSATQARIQClRRCPLlqQRRC------AQHAV--EHRVEY------GV 66  Mycobacte...
jgi:Amir_1114       61 WRQQAACAGQDT----EAFFa---------iSPTKEARELC-ANCPV--AETC------REDQMnwEEPVRLrrlhagGM 118 Actinosyn...
5OAY_A              70 WGGM-----SEDERR 79 
tigr:AAur_pTC10074  72 WGGT-----TPDERK 81  Paenarthrobacter aurescens TC1
WP_005112313       165 WGAT-----TAEQRE 174 Mycobacteroides abscessus
WP_014139940        76 WGGS-----TEEERl 85  Kitasatospora
jgi:Ksed_07590      76 WGGL-----SEDERE 85  Kytococcus sedentarius DSM 20547
Q0RZI9             223 WGGM-----TESDRR 232 Rhodococcus jostii RHA1
BAJ30562            86 WGGL-----TAAERR 95  Kitasatospora setae KM-6054
WP_023550815        74 VAGL-----TYAERH 83  Streptomyces roseochromogenus
P71592              67 WAGIklpggQYRKRE 81  Mycobacterium tuberculosis H37Rv
jgi:Amir_1114      119 YGGL-----TNSDRR 128 Actinosynnema mirum DSM 43827
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