Conserved Protein Domain Family
DUF4209

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pfam13910: DUF4209 (this model, PSSM-Id:404747 is obsolete and has been replaced by 433574)
Domain of unknown function (DUF4209)
This short domain is found in bacteria and eukaryotes, though not in yeasts or Archaea. It carries a highly conserved RNxxxHG sequence motif.
Statistics
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PSSM-Id: 404747
Aligned: 20 rows
Threshold Bit Score: 76.5407
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFC39729      200 LERTLGDLLLLVSKKSKDNPND---LVSIIEnfrelkinELLMVEEIEEAL-------------GKEFVFIFRCFSGPLQ 263  Naegleria gru...
WP_012545693  484 IEALIRNLAEMIGLPVLKQSRSggfNYRTLD--------ELLREDNIKQVF-------------GEDMSLYLRVLFTDPR 542  Thermodesulfo...
WP_015807615  455 ieeAIRNVVELAGGNVLKESRSggfHVRTFD--------DILRDPIISEAL-------------DPELVNYYKILFTDQR 513  Pedobacter he...
WP_015956131  486 IEAAIRNLVQMSNGVVLKSARGggfHLKALD--------ELLRSEQVKQSL-------------GEDIALYLRVILTDQR 544  Gloeothece ci...
CBL57882      484 vEACVRACLQRAGIETRNIRADdteIEPGLS--------ALMELDGVDEAL-------------TPDLAWNIRALYCGPL 542  Propionibacte...
WP_011812566  512 ieHLVRVHLKQAGAKTTNLDKDgieNENGMS--------TLMNLPEAEQVF-------------GRNLAFELRALFCDAF 570  Verminephroba...
XP_002504134  200 VERRCVDLYVSAGGTSRG-------TSPMLS--------EVLASEEFSKAVgeagdvaggigllASALPWALRRAL-HPR 263  Micromonas co...
EDQ89427      152 LECRLRTALASADSASATTATTpapAAALLLr-------DILLHPLLATWA-------------TRAERRLAWLLVGPPT 211  Monosiga brev...
EFC41852      205 VEHLITSVVYTVATLDESKNGNdvvIPLTLT--------EILECEQVKKIL-------------PIKLLNIIKVFMGPPK 263  Naegleria gru...
Q55C59        243 LERMLGDIIFFKLVIVDKKPPI---FGRMLR--------DLLDDDNLLIVL-------------GLPIISLLKVLIGPPI 298  Dictyostelium...
EFC39729      264 GLNLRNVLWHGFLDSENFPRCFASFLILLI 293  Naegleria gruberi
WP_012545693  543 GWNLRNNVCHGISHAGIFNEHIADRVLHAL 572  Thermodesulfovibrio yellowstonii
WP_015807615  514 GWNLRNNVCHGMTNFEEFNYQTADRLIHAL 543  Pedobacter heparinus
WP_015956131  545 GWNVRNNVCHGIFQQHLFSKSLTERLIHIL 574  Gloeothece citriformis
CBL57882      543 GPNLRNRVAHGLLSESESNGAAALFAWWLA 572  Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
WP_011812566  571 GPNLRNELAHGLLDEEAFHSPFAIYAWWLg 600  Verminephrobacter eiseniae
XP_002504134  264 CMNLRNVVWHGHIAPPDAQPELAALALALA 293  Micromonas commoda
EDQ89427      212 GLNLRNLLWHGFITHSTPLPWTFWLILPLL 241  Monosiga brevicollis MX1
EFC41852      264 GLNLRNVLYHGFLDETEIHPSYLSFLWRIY 293  Naegleria gruberi
Q55C59        299 GLNLRNIIWHGFISPNELNLSLLIYIIHLI 328  Dictyostelium discoideum AX4
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