5A7A,1EI7


Conserved Protein Domain Family
TMV_coat

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pfam00721: TMV_coat 
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Virus coat protein (TMV like)
This family contains coat proteins from tobamoviruses, hordeiviruses, Tobraviruses, Furoviruses and Potyviruses.
Statistics
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PSSM-Id: 307047
Aligned: 7 rows
Threshold Bit Score: 123.122
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5A7A_A  18 QWDTQVVEAGVFDDW----WVHVEAWNKFLDNLRGINFSVASSRSQVAEYLAALD-----RDLPADVDRRFAgarg---- 84  Barley stripe mosaic ...
Q88897   4 MYDESFDKSGGPADLmddsWVESVSWKDLLKKLHSIKFALQSGRDEITGLLAALN-----RQCPYSPYEQFP-------- 70  Tobacco rattle virus ...
Q08308  18 PWRQHIIKNRINADW----WIRLDHWETLLADLRGVSFEVNSSRSQVADFINRVP-----KDLPAGVSVRFPgprg---- 84  Peanut clump virus 87...
1EI7_A   1 ---SYSITTPSQFVFlssaWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVW-----KPSP-QVTVRFP-------- 63  Tobacco mosaic virus
O11840   9 TW-----KDMSHNKFmtdrWARVSDVVSVIKQSHAMDLSKAANLSIIKTALAGLGsgwtdNNPFVSPMTRFPqtltmyga 83  Beet necrotic yellow ...
Q9IW99  18 AWDHEQAMKAAVRKF-----ISYDQFSAQLRNWREARLNIIEHATSVLSQVSNLG-----RTHFYSRTERFggss----- 82  Potato mop-top virus Sw
Q06388   9 GYNKELNAMAATHAY-----IRLSTLMSQIESWQATRASVLTHLGVMLNGVSKLG-----ERSFFSRTKRFgaht----- 73  Soil-borne wheat mosa...
5A7A_A  85 -----qigSPNYLPApkffrLDKRTIAELTRLSRLTDq----PHNNRDIELNRAK------RATTNPSPPAQAPSenlTL 149 Barley stripe mosaic ...
Q88897  71 --------DKKVYFL-----LDSRANSALGVIQNASAfkrraDEKNAVAGVTNIPanpnttVTTNQGSTTTTKANtgsTL 137 Tobacco rattle virus ...
Q08308  85 -----nlgSTNYTEVyf-vrIKSELKQKLLSLIAAAD-----QGKNRDVEIGRPNapvvstGAGGNQAIVAQRGVn--TV 151 Peanut clump virus 87...
1EI7_A  64 --------DSDFKVYrynavLDPLVTALLGAF----------DTRNRIIEVE-------------NQANPTTAE----TL 108 Tobacco mosaic virus
O11840  84 lvlyvnlsDPEFALI-----MTKVSTLTDSGLADNASa----NVRRDVVSGNKAEssgktaGTNENSAYTLTVSLaglaq 154 Beet necrotic yellow ...
Q9IW99  83 -----lvgDKLYVCL-----NETRMKTALNNI---------------IVALQTVNgegrarRLGPREASANTGGedsaln 137 Potato mop-top virus Sw
Q06388  74 -----sdgDEIFCDL-----GGEAVTQILSRL---------------TVALQSARgegaqtRNAKRGAAPGTSQ----VE 124 Soil-borne wheat mosa...
5A7A_A 150 RDVqplkdsalhyqy-------vlidlqsarlpVYTRKTFE 183 Barley stripe mosaic virus
Q88897 138 EED------------------------------LYTYYKFD 148 Tobacco rattle virus PpK20
Q08308 152 RDQqplrdgslhyry-------lvqdielagaeQFDRALFE 185 Peanut clump virus 87/TGTA2
1EI7_A 109 DATrrvddatvairsa----innlivelirgtgSYNRSSFE 145 Tobacco mosaic virus
O11840 155 a--------------------------lrleelMWTRDKFE 169 Beet necrotic yellow vein virus S
Q9IW99 138 vahqlaev------------ddlltdesflreaVFTQDKYE 166 Potato mop-top virus Sw
Q06388 125 NEEqgqtdqtlaisnavaelmifvrtkdftmneCYTQDSFE 165 Soil-borne wheat mosaic virus strain Nebraska
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