4AZP,4AZR,4AZN,5BVT


Conserved Protein Domain Family
FABP5

?
cd19468: FABP5 
fatty acid binding protein 5
FABP5 (also known as epidermal FABP, E-FABP, cutaneous fatty-acid-binding protein, C-FABP, psoriasis-associated fatty-acid-binding protein, KFABP, PA-FABP) binds a wide array of ligands. It is an intracellular carrier for long-chain fatty acids and related active lipids, and also selectively delivers specific fatty acids from the cytosol to the nucleus. Its ligands include vitamin A metabolite all-trans-retinoic acid, endocannabinoid and numerous synthetic drugs and probes. It may be involved in keratinocyte differentiation. Mouse FABP5 is found only in the monomeric form; however, human FABP5 can exist as a monomer as well as a domain-swapped dimer. This subgroup belongs to the intracellular fatty-acid binding protein (FABP) family, members of which are small proteins that bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development.
Statistics
?
PSSM-Id: 381243
Aligned: 4 rows
Threshold Bit Score: 237.552
Created: 13-May-2008
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
endocannabinoidligand binding
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:endocannabinoid binding site [chemical binding site]
Evidence:
  • Comment:In addition to binding intracellular fatty acids, FABPs also transport the endocannabinoids anandamide (AEA) and 2-arachidonoylglycerol
  • Comment:the human FABP5-AEA complex is a domain-swapped dimer, the mouse FABP5-AEA complex is monomeric
  • Structure:4AZR; Homo sapiens FABP5 with bound endocannabinoid AEA, contacts 4A
  • Structure:4AZP; Mus musculus FABP5 with bound endocannabinoid anandamide, contacts 4A

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                     ##  #     #   #    #              #   ##                ##      
4AZP_A      9 DLEGKWRLMESHGFEEYMKELGVGLALRKMAAMAKPDCIITCDGNNITVKTESTVKTTVFSCNLGEKFDETTADGRKTET 88  house mouse
4AZR_A      9 QLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTVKTTQFSCTLGEKFEETTADGRKTQT 88  human
4AZN_A     26 DLEGKWRLMESHGFEEYMKELGVGLALRKMAAMAKPDCIITCDGNNITVKTESTVKTTVFSCNLGEKFEETTADGRKTET 105 house mouse
5BVT_A      5 AFLGKWCLISSEGFDEYMKELGVGMAMRKMGSMAKPDVYIIKDGDTITVKTESTFKTSQFSFKLGEKFEENTLDGRKTQT 84  Pygoscelis papua
Feature 1                           #          # #        # #  
4AZP_A     89 VCTFQD-GALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTRVYEK 136 house mouse
4AZR_A     89 VCNFTD-GALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEK 136 human
4AZN_A    106 VCTFQD-GALVQHQQWDGKESTITRKLKDGKMIVECVMNNATCTRVYEK 153 house mouse
5BVT_A     85 LVSLKDdGSLIQEQEWDGKKTIITRKLVDGQLVVECDMNGIKCVRVYQK 133 Pygoscelis papua

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap