1M3D,1T61,1M3D,1T61


Conserved Protein Domain Family
C4

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pfam01413: C4 (this model, PSSM-Id:396133 is obsolete and has been replaced by 460201)
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C-terminal tandem repeated domain in type 4 procollagen
Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome.
Statistics
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PSSM-Id: 396133
Aligned: 119 rows
Threshold Bit Score: 118.442
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1M3D_G          6 FLVTRHSQTTDD-PQCPPGTKILYHGYSLLYVQGNE-RAHGQDLGTAGSCLRKFSTMPFLFCNIN-NVCNFASrNDYSYW 82   cattle
EDV21231      175 NSIALHSQSQTP-PSCPSGYELLWQGYSYWMHTGQGkSVAGQDLSSPGSCLRRFQSMPFIECDGPsGSCFFYS-NSKSFW 252  Trichoplax ad...
XP_005993114  277 QVIAIHSQSEND-PNCPEDWLSLWTGYSFLMHTGAGdQGGGQQLMSSGSCLKDFRSTPFIECQGArGTCHYYA-SKYSFW 354  coelacanth
XP_022532663 1548 pAFAIHSQSKEL-PRCPLSWKPLWIGYSFLMHTGSGdEGGGQSLTSPGSCLPNFRTHPFVECQGEhGTCNFFP-SIYSYW 1625 Mexican tetra
XP_029302725 1543 spVALHSQTSNQ-PDCPPKWRSLWTGFSFLMHTGAGdEGGGQSLTSSGSCLTDFRAQPFVECQGPrGTCHYFA-NIYSFW 1620 Cottoperca gobio
NP_999676    1635 QSLAIHSQSQEI-PQCPGGWRSLWTGYSFTMYT-AAsEGGGQGLESVGSCLENFRATPFIECNGr-GNCHFFS-NEYSFW 1710 purple sea ur...
XP_009025072  620 QPIAIHSQATSV-PDCPRGWSNIWSGFSLALMTGEGgLGVGQTLHSPGSCLTTFRSSPVFECHGd-GKCNHYA-NHISYF 696  Helobdella ro...
XP_009015091 1363 iAMAIHSQTRNV-PDCPPGWSSLWIGYSFFMQA-AGrSGTGQQLSSTGSCLEDFRTTPFIECSTErGSCHYYP-DKVSFW 1439 Helobdella ro...
XP_024347697 1653 NLVAFHSQRPYLeESCPPGWEHAWNGFSMPMVVSAAvSGGVQPLHSPGSCLMNFRALPFIECNNHhGNCFHWQ-DGRSYW 1731 Echinococcus ...
XP_002116296 1399 pvAAFHSQTSTA-PSCPNGWQQLWEGYSYIMQTGTGnQGSGQQLQSPGSCLRNFRSQPFIECNSr-GTCINTV-GGLSFW 1475 Trichoplax ad...
1M3D_G         83 LSTpe------pmPMSmaPITGENIRPFISRCAVCE 112  cattle
EDV21231      253 VTAvnvtd-qfepPTAtvLNFNDNPQSYISRCSVCL 287  Trichoplax adhaerens
XP_005993114  355 LTTvqhdqqfapaPKSetVNEEGLVRQRVSRCRVCM 390  coelacanth
XP_022532663 1626 LTNveqqa-ikpvPEKtvLKEELEQRDNTSRCIVCM 1660 Mexican tetra
XP_029302725 1621 LTRveats-yasdsSSttLTEGWQQRESIGRCNVCM 1655 Cottoperca gobio
NP_999676    1711 LTVideed-qfaiPRKrtIKSGQ-LQSVVSRCRVCQ 1744 purple sea urchin
XP_009025072  697 LSVldrfn-qyskPMSdtYKAAN-LMNKISRCSVCL 730  Helobdella robusta
XP_009015091 1440 LSAfepye-qfekPQHnkYQGGN-LRDYVSRCHVCA 1473 Helobdella robusta
XP_024347697 1732 LRAmtfne-qftkPAGatYKTD--LLRQVSRCSVCR 1764 Echinococcus granulosus
XP_002116296 1476 MKAinasq-qfdpPTQqvLSASA-TSSEISRCIVCK 1509 Trichoplax adhaerens
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