Conserved Protein Domain Family
DUF4878

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pfam12870: DUF4878 (this model, PSSM-Id:403926 is obsolete and has been replaced by 432842)
Domain of unknown function (DUF4878)
This is a family of putative lipoproteins from bacteria. The family is probably related to the NTF2-like transpeptidase family.
Statistics
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PSSM-Id: 403926
Aligned: 9 rows
Threshold Bit Score: 94.0795
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O66537             19 KSCGEpysGAKETVGEFMEEIAEGEGRDAIKYLYPAYRDELAKNFKLPVQFTEMKPSevlACVLSTMGRNIDEVEIKKAI 98  Aquifex ae...
WP_013019348      126 VFSGG---GPSSAVDNVVNALEDGDYAAFKEALCEDTRKSFEELEKASGMSEEEIGKe--LKKNLEKEGLTADYEIVEET 200 Stackebran...
jgi:Cpin_5438      19 GSCKKs-aTPQEVALNFMHAIQESNFDLARDYATKESQQVIQLYSFFDARRND-------SERDKIKKAGI---EVIDTE 87  Chitinopha...
tigr:NAMH_0192     17 TGCSKk-dSPETAAKEFISSFMTGDVESFNKYATDSTKGIFVLAMSMKCNQDKLQNNm--AECLKEVGSNLKSVEVKNVK 93  Nautilia p...
WP_012012678       19 SGCFEe--TAADATENFFYSVKEGNVEDYHKYSTESTQDIMNISFAKCTKDL--------SDCMKDSFQKFTKFKVVDSL 88  Arcobacter...
jgi:HY04AAS1_0900  35 PQTINn-nNPETVLKNFDKDIENGDFKDAAKLLNPDTVSSRGKIWA--------------ERWVKLNTYNVKSITIKDIR 99  Hydrogenob...
OLT56533          118 PAGGAa--TAEAAVKGYLEALSKGDAEAALSYSADQPASKEFLTDD--------------ILKKQIAQWPVGNIRILNSE 181 Mycobacter...
WP_004243305       19 SACGDkqdEAGKAAVEFIEAVASGDGDKAVSLMYFGDLEKDPMAEQITGKFKMIVAE---AGKKIKEQGGLGKVEVAKVE 95  Proteus
Q7VHU7             20 VACGAn--SPKDVAIAFTKDAYKGNGDRLIKYIHLPQMETDATKEIVKGKFKTAAAK---AESKAEAFGGLDEVKAIPEC 94  Helicobact...
O66537             99 AVNPnt-aNVVVKVEDKEGIEKFFSFTvv-kEGDKWYIA 135 Aquifex aeolicus VF5
WP_013019348      201 ESGD----KGTVTVKTDDGEEKIDVVV----EDGEWKLC 231 Stackebrandtia nassauensis
jgi:Cpin_5438      88 ENGDk--aTVTV---LNSSSQQKERLQlv-kENGRWKIS 120 Chitinophaga pinensis DSM 2588
tigr:NAMH_0192     94 QINEne-aVVTLKETYANGKISHENIPvi-kTKDGWKVN 130 Nautilia profundicola AmH
WP_012012678       89 EIDPtt-tVVTVEEYTTDGKIIREKIHvs-kIEEQWKVN 125 Arcobacter butzleri
jgi:HY04AAS1_0900 100 ILGGt--aHATVNITYKDGKTQKNAIDli-kNNGTWYIS 135 Hydrogenobaculum sp. Y04AAS1
OLT56533          182 DMGGv---MARVHVAANFGDQTSDETIlvkkTDGSWKLS 217 Mycobacteroides abscessus subsp. abscessus
WP_004243305       96 YSEDknkaVVTLKTVLKNGEEKTENQNmi-kVDGKWKVE 133 Proteus
Q7VHU7             95 IEEQr--aIIKVFVRFKNGSVDTDTIEli-kVDNEWKVI 130 Helicobacter hepaticus
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