Conserved Protein Domain Family
FadB

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COG1250: FadB (this model, PSSM-Id:224170 is obsolete and has been replaced by 440862)
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Statistics
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PSSM-Id: 224170
Aligned: 93 rows
Threshold Bit Score: 132.752
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17989365  43 RSINHIAIVGAGVMGTGIAQIAAQ-AG----LVTQIFDAR------------EGAAAASLDRLAST-LAKLAEK---GKI 101 Brucella melitensis
11499599   1 ---MKVFVIGAGLMGRGIAIAIASk------HEVVLQDVS-----------------------EKA-----LEA-----A 38  Archaeoglobus fulgidus
16080336  29 KHIRKAAVLGSGVMGSGIAAHLANiGIpvllLDIVPNDLTkeeekkgltkdsSEVRSRLSRQAMKK-LLKQKPAp--LTS 105 Bacillus subtilis
15895279   1 ---MEIGIIGKGKMGRDIFNYISMfD-----YKVILICRQ------------AEQVEEVKSSIEKQ-LRKKLKR---NLI 56  Clostridium acetobu...
15807664   1 MKIKKAAVIGAGVMGAAIAAQLAN-AG----IPVLLLDIV-------------LPDKPDRNFLAKAgVERALKAr-pAAF 61  Deinococcus radiodu...
15892764     --------------------------------------------------------------------------------     Rickettsia conorii
15892765   3 NKIKKVCVIGAGVIGSGIAALIANsSYkvvlLDIIAKDSDd--------------pNKIVNTAKEN-LHKQKPPpppLSF 67  Rickettsia conorii
15604414   3 NEIKKVCVIGAGVMGSGIAALIANsSHqvvlLDILDKDSNd--------------pNKIVKNSVKN-LHKQKLSp--LSF 65  Rickettsia prowazekii
17545193  21 FLVRRVAVLGAGVMGAQIAAHLVN-AK----VPVTLFDLPa-----------KDGLKNGIVLKAIEhLKKLSPAp--LGV 82  Ralstonia solanacearum
15923222   1 MTINKVTVLGAGTMGAQLAALFVN-AG----LKVKLLDIV-------------VD-KNDPNLIAKKsYDKITDKk-rPLL 60  Staphylococcus aure...
17989365 102 SAEDAQTAVSRIEICSSIQELADCDLVVEAIVEKLDAKQALFLELEAVVSGNCILATNTSSLSVTSIARVC--RHPERVA 179 Brucella melitensis
11499599  39 REQIPEELLSKIEFTTTLEKVKDCDIVMEAVFEDLNTKVEVLREVERLTN--APLCSNTSVISVDDIAERL--DSPSRFL 114 Archaeoglobus fulgidus
16080336 106 AKNTSYITPGNLEDDAE--KLKEADWIIEVVVENLEVKKKIFALVDEHRKTGSIVSSNTSGISVQEMAEGRsdDFKAHFL 183 Bacillus subtilis
15895279  57 TEEEYNSKKDAYKVTDNIQDLKNCDIIIEAIYEDEVLKQNILGDVEKIVKDECILATNTSSIPLEIVFAKC--VKKERCL 134 Clostridium acetobu...
15807664  62 MDNDRARLIEVGNLEDDLKKLKDVDWVLEAIIEKLDAKHDLWEKVEKVVKKTAIISSNSSGIPMHLQIEGRseDFQRRFV 141 Deinococcus radiodu...
15892764   1 --------------------------------------MQLLLLIPLHYR---LKDSKRIYQIILNLGSLL------RIS 33  Rickettsia conorii
15892765  68 PDKANFITIGNLEYDLD--LIKECDLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLERLKENLpdNIKSRFV 145 Rickettsia conorii
15604414  66 PDKVNFITIGNLEHDLD--LIKECNLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIASNTSTLPLKKLKVNLpnNIKSRFV 143 Rickettsia prowazekii
17545193  83 KDDAALIQIANYEDDIER--LRDCDLVIEAIAERMDWKHDLYKKVAPHIAPHAIFASNTSGLSIGALSDGFdaELKSRFC 160 Ralstonia solanacearum
15923222  61 FDLNLVSHLTYGNFDDDLVn-DDADLYIEAVKEDIEIKHAVWQQVLQHAKEDALFATNTSGIPINAIAQAFneKDQERFF 139 Staphylococcus aure...
17989365 180 GFHFFNPVPLMKVVEVIDGLTTDPAVGDALLVLAKR-MghHG-IRAKDMPGFIINHAGRAYGTEALKILGECVAPRGDID 257 Brucella melitensis
11499599 115 GVHWMNPPHVMPLVEIVISRFTDSKTVAFVEGFLRElG--KE--VVVCKGQSLVNRFNAAVLSEASRMIEEG-VRAEDVD 189 Archaeoglobus fulgidus
16080336 184 GTHFFNPARYLKLLEIIPIKETDPDILKFMTAFGENvLg-KGvVTAKDTPNFIANRIGTYGLLVTVQEMLKGGYQVGEVD 262 Bacillus subtilis
15895279 135 GLHFFFPVKIIDFVEINELRCTESRYVETIVQFLTTiG--KTsLDLDEKSNFVLTRILTTIVIQIYVIYKENYLSIEQIE 212 Clostridium acetobu...
15807664 142 GAHFFNPPRYLHLLEVIPTDKTDPQVVKDFSEFAEHtLg-KGvVVANDVPGFVANRIGVYGIVRAMQHMEKYGLTPAEVD 220 Deinococcus radiodu...
15892764  34 SIRQDN----MELLELIIDPMIKAEVIERVSEFLTKtLg-KIiVKCNDTSGFIANRVGYFLLELVARKAISQNLDVATID 108 Rickettsia conorii
15892765 146 ITHFFNPPR----------------------------------------------------------------------- 154 Rickettsia conorii
15604414 144 ITHFFNPPRYMELVELIIDHTIKDEVIEKVSVFLTKmLg-KTiIKCNDTPGFIANRVGCFLLELVVHKAIAQNLNFVTID 222 Rickettsia prowazekii
17545193 161 GVHFFNPPRYMHLVELIPTAHTRGDILDKLETFLTSaLg-KGvVRAKDTPNFIANRVGIFSILAVFAESAKYGIPFDVVD 239 Ralstonia solanacearum
15923222 140 GLHFFNPPRIMKLVELIPTSHTKESIILDVKNFAQNvLg-KGvIVVNDVPGFVANRVGTQTMNDIMYRAEQHKLSIVDVD 218 Staphylococcus aure...
17989365 258 RILRESAGFR---MGPLELFDLTGLDVSHPVMESIYN--QFYQE--PRYRPSALTRQMLEGGYVGRKVGQGFYRYEDgkm 330 Brucella melitensis
11499599 190 RVWKHHLGLLytlFGPLGNLDYIGLDVAYYASLYLYK--RFGDE---KFKPPEWLQEKIKKGEVGVKAGKGIYEYGP--- 261 Archaeoglobus fulgidus
16080336 263 SITGPLIGRp--kSATFRTLDVVGLDTFAHVARNVYDkaDGDEK--EVFRIPSFMNDMLEKGWIGSKAGQGFYKKEgkt- 337 Bacillus subtilis
15895279 213 KEVKQNFLT----FGGFEIIDATGINIIIKAIENFNSp-RYEKL---YNILHYNAKKALEQGFAGGSNNKGIIEYELky- 283 Clostridium acetobu...
15807664 221 QLTGPALGRAs--SATFRTADLSGLDIISHVATDIGG--VTPDD--EDFTLTESFKNMVAGGILGDKSGSGFYKKTKdek 294 Deinococcus radiodu...
15892764 109 KIFTTFLGLPs--TGIFGLYDLIGYDVMKLISSSLLA--SLPAN--------DAYHKIICKDPCS--------------- 161 Rickettsia conorii
15892765     --------------------------------------------------------------------------------     Rickettsia conorii
15604414 223 QIFSRCLGLp--nTGIFGLYDLIGHDVMKLISSSLISalPKSDDyhRIYTNTKVFDKMIEHNLIGRKGEGGFYRLSvsng 300 Rickettsia prowazekii
17545193 240 DLTGSKLGRAk--SATFRTADVVGLDTMAHVIKTMQDt-LKDDPfaPVYATPPVLARLVEAGALGQKTGAGFYKKEG--- 313 Ralstonia solanacearum
15923222 219 ALTGQAIGRPk--TGTYALSDLVGLDIAVSVIKGMQQ---VPEEt-PYFHDVKIVNTLFDNGALGRKTKQGFYKKDKetk 292 Staphylococcus aure...
17989365 331 vapp------------------vpqpvpAVDIMPsVwisadcded-----keqlyallrSLGATVEtgaLPS-AEALC 384 Brucella melitensis
11499599 262 ----------------------------KAYEERvErlkkl-------------lrflgLE----------------- 281 Archaeoglobus fulgidus
16080336 338 --------------------------iyELDPVT-Ltygertkmk-----spaleaakqAKGTKAKmkaLIY-SDDRA 382 Bacillus subtilis
15895279 284 --------------------------lkKPFKLKeDeldkykknv-----ilrlqslliNEMAFYInntGIQ-KQKIS 329 Clostridium acetobuty...
15807664 295 gktkilnlnlqtgeyedqgkvrvpavdaVKGKPLaErvnalytlegkegdflratmndgFWYAAKMagtVSGrLQDID 372 Deinococcus radiodurans
15892764     ------------------------------------------------------------------------------     Rickettsia conorii
15892765     ------------------------------------------------------------------------------     Rickettsia conorii
15604414 301 ------------------------kkikEVINISdLsyhpvq------------kvdisFNSLNE----LLS-SNSIY 337 Rickettsia prowazekii
17545193 314 ----------------------------KDIKVLdPqsgqygpsgk----kadeivvriLKKAPAErlkLLReSTNPQ 359 Ralstonia solanacearum
15923222 293 arlvydvekqd----yvpvsqpqlpilnEFNKDLvHnldvifnaqdeaglflwetlrnnFYYSAINvpkATDdFRDID 366 Staphylococcus aureus...
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