1RAV,2OF9,4BJ8,3EW1,3SZJ,2Y32


Conserved Protein Domain Family
Avidin

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pfam01382: Avidin (this model, PSSM-Id:396105 is obsolete and has been replaced by 460182)
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Avidin family
Statistics
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PSSM-Id: 396105
Aligned: 38 rows
Threshold Bit Score: 95.4475
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RAV_B         5 LTGKWTNDLGSNMTIGAVNs-RGEFTGTYITAVTATsne--ikESPLHGTENTIn-----kRTQPTFGFTVNWKFS---- 72  chicken
XP_019853878  90 LAGVWTNELGSKMFISASSyaEGQINGLYCSKVGDAy-----dYYDLNGLYDTDg-----dETSGTLGWTVQWNNGpngn 159 Amphimedon quee...
EDV25964      77 LSGFWFNQHGSVLFLHHRK--DGFLAGSFRTLVESTkgaagrgGRKVRGNVAHPkhv-ytkDKPVALSFSVAFDG----- 148 Trichoplax adha...
Q63Y77        42 FSGTWKNELGSTMRIEQSG---DSVSGTYESAVSENgg---atSGQLSGY-----------VDGDLIAFVVHWDQF---- 100 Burkholderia ps...
CBA15444      33 PLGRWKNELGSTLIVSEFDasSGKISGNYISPSGTTg-----sEYPMVGWINNAspt--ksNNRTVFTFSVRWGTY---- 101 Xanthomonas alb...
Q63V51        46 PIGSWLNELGSTMTIASISg-TGAITGTYVSPSGTTg-----qTFSLSGWFYAAppannglDQVTLVTFSVNWNNTaa-r 118 Burkholderia ps...
ACR32724      34 LVGSWGNQLGSTMKIQSVDpvTGAITGTYRSPSGTSg-----qFFPLVGWTNTApaq-sgqDNVTLVSFTVNWGSY---- 103 Burkholderia gl...
3EW1_C        15 ASSSWQNQSGSTMII-QVDs-FGNVSGQYVNRAQGTgcq--nsPYPLTGR-----------VNGTFIAFSVGWNNSte-n 78  Rhizobium etli ...
3SZJ_B         9 AMSAWVNQDGSTLYINSINa-QGELTGSYINRAAGFacq--nsPYPVNGW-----------VFGTAISFSTKWLNSve-s 73  Shewanella deni...
2Y32_B         3 VNWTWTNQYGSTLAITSFNsnTGAITGTYTNNAANScde--gkPQGVTGWLAYG-------NTGTAISFSVNFLGC---- 69  Bradyrhizobium ...
1RAV_B        73 -ESTTVFTGQCFId-rNGKEVLKTMWLLRSSVNDiGDDWKAT--RVGINIFT 120 chicken
XP_019853878 160 sQSNTAWSGQRYEi--SGKLYIYTTWLLVSQETL-ENNWEST--LTGKDKFC 206 Amphimedon queenslandica
EDV25964     149 -GSTTAWSGEYQVc--NDTPLILTTWILTKPSRNcDGHWAST--LIGKDTFK 195 Trichoplax adhaerens
Q63Y77       101 -QAITAWVGQGGPg--ASSDRINTLWQMTQQVEA-GEEWASI--NAGADIFV 146 Burkholderia pseudomallei
CBA15444     102 -GSVTAWTGTCVDgtkYKPALITTLWHLARGSSD--YSWDHV--LTNTDGFa 148 Xanthomonas albilineans GPE PC73
Q63V51       119 yNSITTWSGLCQIt--NNVPTITALYYYSNAFAQ--YSWKHV--NVGQDIFH 164 Burkholderia pseudomallei
ACR32724     104 -GTITSWSGLCRTq--NQVPTIAALWYFAQSNAQ--FTWSHV--QTGQDVFS 148 Burkholderia glumae BGR1
3EW1_C        79 cNSATGWTGYAQVn--GNNTEIVTSWNLAYEGGS-----GPAi-EQGQDTFQ 122 Rhizobium etli CFN 42
3SZJ_B        74 cNSITSWSGFYINt--GGQGKISTLWQLVVNGSS-----SPSqiLKGQDVFS 118 Shewanella denitrificans OS217
2Y32_B        70 -GSTTVWTGQL-----NNATGFQGLWYLSLAEAV---AWNGI--SAGADTFT 110 Bradyrhizobium japonicum
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