Conserved Protein Domain Family
ruvB

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PRK00080: ruvB 
Holliday junction branch migration DNA helicase RuvB
Statistics
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PSSM-Id: 234619
Aligned: 939 rows
Threshold Bit Score: 365.608
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
258543668  10 E--IDAarreeDvgESTLRPQTLHDFTGQKASRENLSIFIKAAKQRGDALDHVLLHGPPGLGKTTLAQIVARELGVGFRA 87 
12045219    2 KlqIKP-------------PNTFDEFVGKQEIISQIQLSIKASKLNKTQLDHILLYGPPGVGKTTLARLIANELKTKLQI 68 
304373059   1 ---MQE--------NLEIRPKNFEQFIGQQKLVETLKVLISSSKKRKKPLDHILFYGSPGTGKTTLANILATETQSKIKY 69 
13508275    2 KlqIKP-------------PNNFAEFVGKQEIINQIQLSIKASRINKAQLDHILLYGPPGVGKTTLARLIASEMNTKLQI 68 
31544807    1 --------------MKLARPNNFDEFIGKNELKQKLLTFINASISQNKALDHVLFYGPPGVGKTSLAQIIANELKSKIKI 66 
13358011    1 ---MKT--------NYEFRPQYLKDFIGKEQLKNNLKVYLTASKRLENSFDHTLLHGLSGTGKTTLALIIANEMNVNCHI 69 
42561076    1 ----------------MFRPEKWEEYIGQTNILDNLKVFIKSAKKQNKVVDHIFIYGPSGYGKTSLAYLLAKQLKTNIRI 64 
50365238    1 -----------M--SNDFRPSKWSEYIGQEKVIKNLKICIESSIKQNKVLDPIIFSGPSGMGKTSLAYLLSKILKTKIHI 67 
170762291   1 ---MKT--------NYEFRPQYLKDFIGKEQLKNNLKVYLTASKRLENSFDHTLLHGLSGTGKTTLALIIANEMNVNCHI 69 
209554525   1 ---MKT--------NNEFRPQYLKDFIGKDQLKSNLKIYLNATKRLKSSFDHTLLHGLAGTGKTTLATIIANEMGVDCHM 69 
258543668  88 TSGPVIQRAGDLAAILTNLQPRDVLFIDEIHRLQPAIEEILYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVAATTRAG 167
12045219   69 IQGGHLQKPSDFLNAISLIKKGDVLFIDEIHAVAPNVMELMYPVMDVFKIQVLIGKDFNSKIVEMKVNPFTLIGATTQLG 148
304373059  70 IQGPLLEKKSDILSMLANVEKGHIIFIDEIHSINKNIEELLYSAMEEFVIDIQIGVEGESKIMRMKLPEFTLVGASTKIS 149
13508275   69 IQGGHLQRPSDFLNAVSLIKKGDVLFVDEIHAVAPSVMELMFPVMDDFRVQVLIGKDFNSKMVEMKVNPFTWIGATTQFG 148
31544807   67 LQASQIQKPADLLNAFSLLSKNDVLFIDEIHSLSPTIMELLFPIMEDYVVDILIGKEFNSKFTRMKLPPFTLIGATTMYG 146
13358011   70 TQGNLLNKPIDIINLLSLIKENDVVFIDEIHACGLGAFETLYSVLEDFCIDINIGKDFNSKMTRLKIPHFTLIGATTIFG 149
42561076   65 LNGPNLQKASDIISILTSIKEKDVLFIDEIHAVNKEVLEIIYPVLEENKLNIIIGKDYNSKVVNIDLPKFTIICATTEIN 144
50365238   68 VNGPSLQRPSDLISVLTSIKENQILFIDEVHSVSKDIMEVLYPVLEENKLSIIIGKEYNSKIVNIKLPNFTIITATTEIN 147
170762291  70 TQGNLLNKPIDIINLLSLIKENDVVFIDEIHACGLGAFETLYSVLEDFCIDINIGKDFNSKMTRLKIPHFTLIGATTIFG 149
209554525  70 TQGNLLNKPVDIINLLSLIKENDVIFVDEIHACGLAAFETLYSVLEDFCIDISIGKDFNAKMTRLKVPHFTLIGATTMLG 149
258543668 168 LLATPLRDRFGIPLRLVFYTPEELCKIVARGAEK-LDFALTLGGAMEIARRSRGTPRIAGRLLRRVRDFASVTvpAGV-P 245
12045219  149 KIINPLEDRFGVILNINYYSNAEIEKMVSIYGKQ-MKLELNSNEISAITEHSKQTPRIAIRIVRRIFEQ---K------I 218
304373059 150 SISLPLKNRFGLTAKIYEYTSEEMKKIIQNSSNI-LNIEISEELVHYVVDFTNKTPRIANNLLKRIRDFAIVE---DTkT 225
13508275  149 KIINPLEDRFGMILNIDYYSNQEIERIVSIYGEQ-MELELKPEEITQITQHSKQTPRIAIRIVKRLFE--------QK-I 218
31544807  147 RIIDPLEERFGILLQLDYYQDDEIFEIIRSINAK-EKIKLTKDEMVQIAEHSKGTPRNALRIYKRVMDFKLF---DQEiT 222
13358011  150 KIPKSLEERFGHIFHLNEYEPSEISAIILKNNQMhFQIDLNEEEIDLIANNAKGIPRLANRLLKRVVDF----------K 219
42561076  145 KIPLPLLNRFPINFTMQEYNLEDMSKIIELYCNK-FQIKLDQDIYLYLASFCRKTPRIAINLIKRIKDHIICDnpK---I 220
50365238  148 KLPFPFLNRFPIQFELEGYNHDDLTKIIINTFNK-LQYKIEIEQAKIIAKFSRLVPRVAINLVKRIYDFLITEkiK---D 223
170762291 150 KIPKSLEERFGHIFHLNEYEPSEISAIILKNNQMhFQIDLNEEEIDLIANNAKGIPRLANRLLKRVVDF-KI----NG-- 222
209554525 150 KIPEPLEERFGHVFYLSEYETSEIAAIILKNNQIhFQINLNDQEIDLIANSAKGIPRLANRLLKRVVDFKIN---G---- 222
258543668 246 VEAEVADAAL-KRLEVDALGLDAMDRRYLRRIAEYHHGGPVGVETLAAALAESRDTLEDVIEPYLIQEGLVLRTTRGRVL 324
12045219  219 VNKKIDLEGLfKNLMIYKNGLQSIDVQYLEVLNRQ--NEPQGIKSISSMLGIDRHTIENKIEPFLLRENMIQKTKKGRII 296
304373059 226 ISKDIIDKTF-NGIGIFLNGLNLQNIEYLNLLANVFKRKTVSLDVICGIMKETKENIINNIEPILLQLELIEKTPRGRKI 304
13508275  219 VNKKIDLAALfKSLMIYKNGLQSIDVQYLKALNGQYE--PQGIKSICSMLGIDKSTVENKIEPFLLRENMIQKTKKGRII 296
31544807  223 I-----KSIL-EKLNIYQYGLSNLDLEYLKSFDDN-PKLYLGLKSLSLISGIDCFTIESKIEPYLLKMNLIKKTSKGRQI 295
13358011  220 INGFNDIKNIfKKIQIYEFGLDEQDINYLNVLYRQ--DNEIGLKSIAQILRLDQYTIETKIEPYLIQHHFINKNLRGRKI 297
42561076  221 IDVNYIKKVL-DKLEIYELGLTITEINYLKMITKN---KRIGLDNIAHLLNTTPLIIANNIEPFLIRESLIIRTIKEREI 296
50365238  224 LSEKNLIWVF-KQMGLYEYGLNEKDLDYLFTLL---ENNTLSLDSLAQIINVPNQTILNNMEPIFLKERLIIKTGRGRQL 299
170762291 223 --FNDIKNIF-KKIQIYEFGLDEQDINYLNVLYRQ--DNEIGLKSIAQILRLDQYTIETKIEPYLIQHHFINKNLRGRKI 297
209554525 223 --FDNIKNIF-EKIQIYDFGLEEQDINYLNVLYQQ--ENEIGLKSIAQILRLDQYTIETKIEPYLIQHHFINKNLRGRKI 297
258543668 325 GERGWRHLGL----TP 336
12045219  297 TNSGREYLV-----NF 307
304373059 305 TQKGLDYLISi---KK 317
13508275  297 TRTGRNYLT-----SC 307
31544807  296 TQKAIQYFKDn----- 306
13358011  298 TIEGIDFLKN----NQ 309
42561076  297 TYKGLKYIQNf----- 307
50365238  300 TNKGKIYLEKnknqHI 315
170762291 298 TIEGIDFLKN----NQ 309
209554525 298 TAKGIEFLKN----NQ 309
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