Conserved Protein Domain Family
IFT43

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pfam15305: IFT43 
Intraflagellar transport protein 43
Intraflagellar transport protein 43 (IFT43) is a subunit of the IFT complex A (IFT-A) machinery of primary cilia.
Statistics
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PSSM-Id: 464631
Aligned: 17 rows
Threshold Bit Score: 80.1248
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGF83776     192 RETASrrdRRGSRSGVPVANNDIDDEkeKVRKTTVAGPmtayaassrkmDDGDq-VMVIIPDLMDV--EDEDMSATVAVA 268
EGD73159      12 WGDES---KGKTTRRNRGESAPEEDE--RLKMTVPVEE-----------DSDD--DIPEIPELQDQveEEEDITTKVAEA 73 
XP_003062227 130 WSEDA---RGGGDDANANASANANARarRAAAATTY-------------DDDEv---------SSS--EDEGRDGRLSYA 182
XP_001696653 112 ilgEDskkFVGVSRRKQEQLARGDDE--VSRKNLKYET-----------LTAGvdGIMEIPELEEE--GREDLSNIVAEA 176
XP_002901440  72 gSSTSetkRGGRRRKGSEAPASGGER--RNQKNRYFEE-----------DDETt-DIMEIPDLEEEe-REQDITTMVAEA 136
CBN74139      78 ASSEAqkkSGGQKTTTQQKPIEGGSN--RANRRNHF-------------DNEEt-EILVIPDLEDE--GEEDVETKVAAA 139
XP_011406124  15 WTYEApkhKSKKNAPDNDLTFEIEDE--RLKQ-----------------DNEIedFIDNIPDLDEM--NEGDLVSQVAAP 73 
EEN69224      91 WADDTgkeKKSA----------------RLRSDSPPRR-----------DDSDe-DIPVIPDLDDV--QEEDMATQIAAP 140
Q28CW2        55 WADDSs-gPSKS---TKRMTEDVEDS--RLKQQSLDES-----------DEGE--DIPVIPDLEDV--QEEDLALQVASP 113 tropical clawed...
E2QSX5        62 WADDSm-kTSKS---GRRASEEVEEGshRLRQQSFGGS-----------DDGG--DIPVIPDLEDV--QEEDFALQVAAP 122 dog
EGF83776     269 PTIKTk----AMKTISEIESDISQSDAvvnqL-----QHLSvPGIDMSILIRaALCPPSQLDELDQPWDWDLLFTQVSSE 339
EGD73159      74 PTANI-----QMATMADLDKELSSTLS----F-----TQTD-SGVDLKLLIN-NLTPSHLLKEEDKEWDFVHVFTEIKSE 137
XP_003062227 183 PRYNPnrargRVQTKEELDAAAPKRAHdlgrRgvdggVTFEdDGIDLSVLTSrLLTREECEEDFNEVWTADSLWEELMPV 262
XP_001696653 177 PKVRTn----KVQGMEELEEDMHYK------L-----PAMDdRDIDLSLLTA-VLCSSEQVAEAEDPWDPDIVLTEVASA 240
XP_002901440 137 PRNTTr----AVQSLKQLDKEIKFA------L-----PSAQtHGVDLHLLTS-GLCPERAVSEDDEPWDFDTLLNDIAQE 200
CBN74139     140 PQNTTr----RVPSLRELDEDLKYA------------IPSGaDGLDMSLLTK-TLVPSEMLEEDDSPWEFDSLLQSVTQE 202
XP_011406124  74 PSAAVq----QITTYKQLDNDLAKHAS----L-----FTMD-GEIDLKALAQ-VISPESEIQEDDKVWEWDKLFAEVSHE 138
EEN69224     141 PSLQVn----KIATYRELDTDLFKQAA----F-----LILD-DEIDLKPLAK-CLSAETDVLEEDKPWDWDRLFTEVTSE 205
Q28CW2       114 PSVQVn----RVLTYKDLDNDLMRHAA----F-----QTLD-GDIDLKLLTK-VLSPEPEVREENVQWDWDLLFTEVSSE 178 tropical clawed...
E2QSX5       123 PSIQVn----RVMTYRDLDNDLMKYAA----F-----QTLD-GEIDLKLLTK-VLAPEHEVREDDVNWDWDRLYTEVSSE 187 dog
EGF83776     340 IHAEKEK 346
EGD73159     138 LAAEEEK 144
XP_003062227 263 LQKHEDE 269
XP_001696653 241 INAEREK 247
XP_002901440 201 IQKDLDD 207
CBN74139     203 FNAEKRl 209
XP_011406124 139 IESTWRQ 145
EEN69224     206 LQVEWEA 212
Q28CW2       179 LITEWDv 185 tropical clawed frog
E2QSX5       188 LLSEWDl 194 dog
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