Conserved Protein Domain Family
HN

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pfam00423: HN 
Haemagglutinin-neuraminidase
Statistics
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PSSM-Id: 278832
Aligned: 7 rows
Threshold Bit Score: 584.093
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P11235    39 SVQAVTLI--LVIVTLGElvrmINDQGLSNQ------------LSSIADKIRESATMIASAVG----VMNQVIHGVTVSL 100 Mumps virus Miyahar...
Q6YIS0    32 VSTVISLI--IAIISLAF----IIDNKINIQsldplrgledsyLVPIKDKSESISQDIQEGIFp---RLNLITAATTTTI 102 Reptilian ferlavirus
Q88261    46 ALSIATVI--ICIVIAARqgysMERYSMTVEa----------lNTSNKEVKESLTSLIRQEVIt---RAANIQSSVQTGI 110 Sendai virus (strai...
ABX57742  44 VLIVLGLI--LAIIGIGIgassFSASGITGNttke----irliVEEMSYGLVRISDSVRQEISp---KVTLLQNAVLSSI 114
Q786F2    43 FVMFLSLIglLAIAGIRLhraaIYTAEIHKS------------LSTNLDVTNSIEHQVKDVLTp---LFKIIGDEVGLRT 107 Measles virus strai...
O89343    50 FNTVIALL--GSIIIIVMnimiIQNYTRTTDnqal----ikesLQSVQQQIKALTDKIGTEIGp---KVSLIDTSSTITI 120 Hendra virus horse/...
Q91UL0    31 FLTVVTLA--ISVASL------LYSMGASTPs----------dLVGIPTRISRAEEKITSTLGsnqdVVDRIYKQVALES 92  Newcastle disease v...
P11235   101 PLQIEGNQNQLLSTLA-------------TICTgKKQV-----------SNCSTNIPLVNDLRFInginkfi-------- 148 Mumps virus Miyahar...
Q6YIS0   103 PRSIAIQTKDLSDLIM-------------NRCY-PSVVnndtscdvlagAIHSNLFSQLDPSTYW--------------- 153 Reptilian ferlavirus
Q88261   111 PVLLNKNSRDVIRLIE-------------KSCNrQELTqlcd---stiaVHHAEGIAPLEPHSFW--------------- 159 Sendai virus (strai...
ABX57742 115 PALVTTETNTIINAVK-------------NHCNsPPTPpppt---eaplKKHETGMAPLDPTTYW--------------- 163
Q786F2   108 PQRFTDLVKFISDKIKflnpdreydfrdlTWCInPPERikldydqycadVAAEELMNALVNSTLLearatnq-------- 179 Measles virus strai...
O89343   121 PANIGLLGSKISQSTS-------------SINEnVNDKckft---lpplKIHECNISCPNPLPFReyrpisqgvsdlvgl 184 Hendra virus horse/...
Q91UL0    93 PLALLNTETTIMNAIT-------------SLSYqINGA-----------ANNSGWGAPIHDPDYIggigkel-------- 140 Newcastle disease v...
P11235   149 --iedyathDFSIGHP----------LNMPSFIPTATSPNGCTRIPSFSLGKTHWCYTHNVINANCKDHT--SSNQYISM 214 Mumps virus Miyahar...
Q6YIS0   154 ---------TCSSGTPtmnq--tvklLPDNSQIPGSTYSTGCVRIPTFSLGSMIYSYSHNVIYEGCNDHS--KSSQYWQL 220 Reptilian ferlavirus
Q88261   160 ---------RCPAGEPylssdpevslLPGPSLLSGSTTISGCVRLPSLSIGEAIYAYSSNLITQGCADIG--KSYQVLQL 228 Sendai virus (strai...
ABX57742 164 ---------TCTSGTPrfysspnatfIPGPSPLPHTATPGGCVRIPSMHIGSEIYAYTSNLIASGCQDIG--KSYQNVQI 232
Q786F2   180 --flavskgNCSGPTTirgqfsnmslSLLDLYLSRGYNVSSIVTMTSQGMYGGTYLVGKPNLSSKGSELSqlSMHRVFEV 257 Measles virus strai...
O89343   185 pnqiclqktTSTILKPrli----------syTLPINTREGVCITDPLLAVDNGFFAYSHLEKIGSCTRGI--AKQRIIGV 252 Hendra virus horse/...
Q91UL0   141 ---ivddasDVTSFYPsa-------fQEHLNFIPAPTTGSGCTRIPSFDMSATHYCYTHNVILSGCRDHS--HSYQYLAL 208 Newcastle disease v...
P11235   215 GILVQTASGYPMFK--TLKIQYLSDGLNRKSCSIATVPDGCAMYCYVSTQLETDDYAGSSPPTQKLTLLFY-----NDTV 287 Mumps virus Miyahar...
Q6YIS0   221 GYISTSKTGEPLQQ--VSRTLTLNNGLNRKSCSTVAQGRGAYLLCTNVVEDERTDYSTEGIQDLTLDYIDI-----FGAE 293 Reptilian ferlavirus
Q88261   229 GYISLNSDMFPDLNpvVSHTYDIND--NRKSCSVVATGTRGYQLCSMPIVDERTDYSSDGIEDLVLDILDL-----KGRT 301 Sendai virus (strai...
ABX57742 233 GVLDRTPEGNPEMSpmLSHTFPIND--NRKSCSIVTLKRAAYIYCSQPKVTEFVDYQTPGIEPMSLDHINA-----NGTT 305
Q786F2   258 GVIRNPGLGAPVFH--MTNYFEQPVSNDFSNCMVALGELKFAALCHREDSITIPYQGSGKGVSFQLVKLGV--------- 326 Measles virus strai...
O89343   253 GEVLDRGDKVPSMF--MTNVWTPPNPSTIHHCSSTYHEDFYYTLCAVSHVGDPILNSTSWTESLSLIRLAVrpksdSGDY 330 Hendra virus horse/...
Q91UL0   209 GVLRTSATGRVFFS--TLRSINLDDTQNRKSCSVSATPLGCDMLCSKATETEEEDYNSAVPTRMVHGRLGF-----DGQY 281 Newcastle disease v...
P11235   288 TERTISPTGLEGN--WATLVPGVGSGIYFENKLIFPAYGGVlpnsslg-vksarefFRPVNPYNPCSGPQ-QDLDQRALR 363 Mumps virus Miyahar...
Q6YIS0   294 RSYRYTNNEVDLDrpYAALYPSVGSGTVYNDRILFLGYGGL---------------MTPYGDQAMCQAPEcTSATQEGCN 358 Reptilian ferlavirus
Q88261   302 KSHRYSNSEIDLDhpFSALYPSVGSGIATEGSLIFLGYGGL---------------TTPLQGDTKCRIQGcQQVSQDTCN 366 Sendai virus (strai...
ABX57742 306 KTWIYSPTEVVTDvpYASMYPSVGSGVVIDGKLVFLVYGGL---------------LNGIQVPAMCLSPEcPGIDQAACN 370
Q786F2   327 ---WKSPTDMRSWvpLSTDDPVI-------DRLYLSSHRGViadnqakwavpttrtDDKLRMET-CFQQAcKGKNQALCE 395 Measles virus strai...
O89343   331 NQKYIAITKVERGk-YDKVMPYGPSGIKQGDTLYFPAVGFLp-------------rTEFQYNDSNCPIIHcKYSKAENCR 396 Hendra virus horse/...
Q91UL0   282 HEKDLDVTTLFGD--WVANYPGVGGGSFIDSRVWFSVYGGLkpnspsdtvqegkyvIYKRYNDT-C--PDeQDYQIRMAK 356 Newcastle disease v...
P11235   364 -SYFPSYFSNRRVQSAFLvcAWNQILVTNCELVVP--SNNQTLMGAEGRVLLINNRLLYYQRSTS---WWPYellyeISF 437 Mumps virus Miyahar...
Q6YIS0   359 sNQLIGYFSGRQIVNCII--EIITVGTEKPIIRVRtiPNSQVWLGAEGRIQTLGGVLYLYIRSSG---WHAL-----AQT 428 Reptilian ferlavirus
Q88261   367 eALKITWLGGKQVVSVLI--QVNDYLSERPRIRVTtiPITQNYLGAEGRLLKLGDQVYIYTRSSG---WHSQ-----LQI 436 Sendai virus (strai...
ABX57742 371 aSQYNQYLSGRQVVNGIA--TVDLMNGQKPHISVEtiSPSKNWFGAEGRLVYMGGRLYIYIRSTG---WHSP-----IQI 440
Q786F2   396 nPEWAPLKDNRIPSYGVL--SVNLSLTVELKIKIA---------SGFGPLITHGSGMDLYKTNHNnvyWLTIppmknLAL 464 Measles virus strai...
O89343   397 lSMGVNSKSHYILRSGLL--KYNLSLGGDIILQFIeiADNRLTIGSPSKIYNSLGQPVFYQASYS---WDTM-----IKL 466 Hendra virus horse/...
Q91UL0   357 sSYKPGRFGGKRIQQAILsiKVSTSLGEDPVLTVP--PNTVTLMGAEGRILTVGTSHFLYQRGSS---YFSPal------ 425 Newcastle disease v...
P11235   438 TFTNSgQSSVNMSWIPIYSFT--------RPGSGNCSGENVCPTACVSGVYLDPWPLTPYSHQsginrnfyFTGALLNSS 509 Mumps virus Miyahar...
Q6YIS0   429 GIILT-LDPIRISWIVNTGYS--------RPGNGPCSASSRCPAQCITGVYTDIFPLSQNYGY--------LATVTLLSG 491 Reptilian ferlavirus
Q88261   437 GVLDV-SHPLTISWTPHEALS--------RPGNEDCNWYNTCPKECISGVYTDAYPLSPDAAN--------VATVTLYAN 499 Sendai virus (strai...
ABX57742 441 GVIYT-MNPLAITWVTNTVLS--------RPGSAGCDWNNRCPKACLSGVYTDAYPISPDYNH--------LATMILHST 503
Q786F2   465 GVINT------LEWIPRFKVSpnlftvpiKEAGEDCHAPTYLPAEVDGDVKLSSNLVILPGQD--------LQYVLATYD 530 Measles virus strai...
O89343   467 GDVDT-VDPLRVQWRNNSVIS--------RPGQSQCPRFNVCPEVCWEGTYNDAFLIDrln--------wvSAGVYLNSN 529 Hendra virus horse/...
Q91UL0   426 ------lyPMTVSNKTATLHSpytfnaftRPGSIPCQASARCPNSCVTGVYTDPYPLIFYRNHtl----rgVFGTMLDGE 495 Newcastle disease v...
P11235   510 TTRVNPTLYVSALNNLKVLAPYGNQGLFASY--------------TTTTCFqdTGDASVYCVYIMELASNIVGEFQILPV 575 Mumps virus Miyahar...
Q6YIS0   492 VDRVNPVISYGTSTGRVADSQLTSSSQVAAY--------------TTTTCF--TFNQKGYCYHIIELSPATLGIFQPVLV 555 Reptilian ferlavirus
Q88261   500 TSRVNPTIMYSNTTNIINMLRIKDVQLEAAY--------------TTTSCI--THFGKGYCFHIIEINQKSLNTLQPMLF 563 Sendai virus (strai...
ABX57742 504 STRSNPVMVYSSPTNMVNYAQLTTTAQIAGY--------------TTTSCF--TDNEVGYCATALELTPGTLSSVQPILV 567
Q786F2   531 TSRVEHAVVYY----------VYSPSRSFSYfypfrlpikgvpieLQVECF--TWDKKLWCRHFCVLADSESGGHITHSG 598 Measles virus strai...
O89343   530 QTAENPVFAVFKDNEILYQVPLAEDDTNAQK--------------TITDCF--LLENVIWCISLVEIYDTGDSVIRPKLF 593 Hendra virus horse/...
Q91UL0   496 QARLNPASAVFDSTSRSRITRVSSSSIKAAY--------------TTSTCFkvVKTNKTYCLSIAEISNTLFGEFRIVPL 561 Newcastle disease v...
P11235   576 LTRLTI 581 Mumps virus Miyahara vaccine
Q6YIS0   556 VTEIPK 561 Reptilian ferlavirus
Q88261   564 KTSIPK 569 Sendai virus (strain Ohita)
ABX57742 568 MTKIPK 573
Q786F2   599 MVGMGV 604 Measles virus strain Ichinose-B95a
O89343   594 AVKIPA 599 Hendra virus horse/Australia/Hendra/1994
Q91UL0   562 LVEILK 567 Newcastle disease virus B1/48
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