3TJ0,2Q06


Conserved Protein Domain Family
Flu_NP

?
pfam00506: Flu_NP 
Click on image for an interactive view with Cn3D
Influenza virus nucleoprotein
Statistics
?
PSSM-Id: 278907
Aligned: 4 rows
Threshold Bit Score: 832.006
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3TJ0_A  40 LAPPSNKRtrnpSPERATTSSEddvgrktqkKQTPTEIKKSVYNMVVKLGEFYNQMMVKAGLNdDMERNLIQNAHAVERI 119
Q9Q0U8   1 MASQGTKR----SYEQMETGGE---------RQNATEIRASVGRMVGGIGRFYIQMCTELKLS-DYEGRLIQNSITIERM 66  Influenza A virus (A/...
P04665  38 LAPPSNKRtrnpSPERTTTSSEtdigrkiqkKQTPTEIKKSVYKMVVKLGEFYNQMMVKAGLNdDMERNLIQNAQAVERI 117 Influenza B virus (B/...
2Q06_A   7 MASQGTKR----SYEQMETGGE---------RQNATEIRASVGRMVGGIGRFYIQMCTELKLS-DQEGRLIQNSITIERM 72 
3TJ0_A 120 LLAATDDKKTEFQKKKNArdvkEGKeeiDHNKTGGTFYKMvRDDKTIyfsPIRITFLKEEVKTMYK-TTMGSDGFSGLNH 198
Q9Q0U8  67 VLSAFDERRNKYLEEHPS----AGK---DPKKTGGPIYRR-RDGKWV---RELILYDKEEIRRIWRqANNGEDATAGLTH 135 Influenza A virus (A/...
P04665 118 LLAATDDKKTEYQKKRNArdvkEGKeeiDHNKTGGTFYKMvRDDKTIyfsPIKITFLKEEVKTMYK-TTMGSDGFSGLNH 196 Influenza B virus (B/...
2Q06_A  73 VLSAFDERRNRYLEEHPS----AGK---DPKKTGGPIYRR-RDGKWV---RELILYDKEEIRRIWRqANNGEDATAGLTH 141
3TJ0_A 199 IMIGHSQMNDVCFQRSKALKRVGLDPSLISTFAGSTIPRRSGATGVAIKGGGTLVAEAIRFIGRAMADRGLLR---DIKA 275
Q9Q0U8 136 MMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRgenGRRT 215 Influenza A virus (A/...
P04665 197 IMIGHSQMNDVCFQRSKGLKRVGLDPSLISTFAGSTLPRRSGTTGVAIKGGGTLVDEAIRFIGRAMADRGLLR---DIKA 273 Influenza B virus (B/...
2Q06_A 142 MMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRgenGRRT 221
3TJ0_A 276 KTAYEKILLNLKNKCSAPQQKALVDQVIGSRNPGIADIEDLTLLARSMVVVRPSVASKVVLPISIY--AKIPQLGFNVEE 353
Q9Q0U8 216 RIAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYglAVASGYDFEREG 295 Influenza A virus (A/...
P04665 274 KTAYEKILLNLKNKCSAPQQKALVDQVIGSRNPGIADIEDLTLLARSMVVVRPSVASKVVLPISIY--AKIPQLGFNTEE 351 Influenza B virus (B/...
2Q06_A 222 RIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYglAVASGYDFEREG 301
3TJ0_A 354 YSMVGYEAMALYNMATPVSILRMGDDAKDKSQLFFMSCFGAAYEDLRVLSALTGTEFKPRSALKCKGFHVPAKEQVEGMG 433
Q9Q0U8 296 YSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVAPRGQLSTRGVQIASNENMETMD 375 Influenza A virus (A/...
P04665 352 YSMVGYEAMALYNMATPVSILRMGDDAKDKSQLFFMSCFGAAYEDLRVLSALTGTEFKPRSALKCKGFHVPAKEQVEGMG 431 Influenza B virus (B/...
2Q06_A 302 YSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMD 381
3TJ0_A 434 AALMSIKLQFWAPMTRSGGNEVGGDGGSGQISCSPVFAVERPIALSKQAVRRMLSMNIEGRDADVKGNLLKMMNDSMAKK 513
Q9Q0U8 376 SSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFTGNTEGRTSDMRTEIIRMMESSRPED 455 Influenza A virus (A/...
P04665 432 AALMSIKLQFWAPMTRSGGNEVSGEGGSGQISCSPVFAVERPIALSKQAVRRMLSMNVEGRDADVKGNLLKMMNDSMAKK 511 Influenza B virus (B/...
2Q06_A 382 SSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPED 461
3TJ0_A 514 TSgnaFIGKKMFQISDKNKTNPVeiqikqtIPNF--------FFGrDTAEDYDD 559
Q9Q0U8 456 VS---FQGRGVFELSDEKATNPI-------VPSFdmsnegsyFFG-DNAEEYDN 498 Influenza A virus (A/goose/Guangdong/1/1996(H5N1))
P04665 512 TSgnaFIGKKMFQISDKNKVNPIeipikqtIPNF--------FFGrDTAEDYDD 557 Influenza B virus (B/Lee/1940)
2Q06_A 462 VS---FQGRGVFELSDEKATNPI-------VPSFdmsnegsyFFG-DNAEEYDN 504
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap