Conserved Protein Domain Family
Gag_MA
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pfam01140: Gag_MA (this model, PSSM-Id:395907 is obsolete and has been replaced by 426076)
Matrix protein (MA), p15
The matrix protein, p15, is encoded by the gag gene. MA is involved in pathogenicity.
Links
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Statistics
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PSSM-Id: 395907
Aligned: 4 rows
Threshold Bit Score: 197.04
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
EGV94693       2 GQQLTTPLSLTLGHWQDVLSRARKESVEIRKKKWRTLCFSEWPALNTGWPRDGTFDLTTILQVKTRVFQPGPWGYPDQVP 81  Chinese hamster
Q27ID9         2 GQTVTTPLSLTLQHWGDVQRIASNQSVDVKKRRWVTFCSAEWPTFNVGWPQDGTFNLGVISQVKSRVFCPGPHGHPDQVP 81  Xenotropic MuLV...
P03332         2 GQTVTTPLSLTLGHWKDVERIAHNQSVDVKKRRWVTFCSAEWPTFNVGWPRDGTFNRDLITQVKIKVFSPGPHGHPDQVP 81  Moloney murine ...
XP_023109340   2 GQTVTTPLSLTLDHWSEVRARAHNQGVEVRKKKWITLCEAEWVMMNVGWPREGTFTIDNISQVEERVFAPGPYGHPDQVP 81  domestic cat

EGV94693      82 YIVTWESLSRDPPPWVRPFLPPRLSGPcpTPLPLPaPLIPTPSAPP 127 Chinese hamster
Q27ID9        82 YIVTWEALAYDPPPWVKPFVSPKPPPL--PTAPVL-PPGPSAQPPS 124 Xenotropic MuLV-related virus VP62
P03332        82 YIVTWEALAFDPPPWVKPFVHPKPPPPlpPSAPSL-PLEPPRSTPP 126 Moloney murine leukemia virus isolate Shinnick
XP_023109340  82 YITTWRSLATDPPPWVRPFLPPPKHPRtdPPAPLPqPLSPQPSAPP 127 domestic cat
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