1DNV


Conserved Protein Domain Family
Denso_VP4

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pfam02336: Denso_VP4 
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Capsid protein VP4
Four different translation initiation sites of the densovirus capsid protein mRNA give rise to four viral proteins, VP1 to VP4. This family represents VP4.
Statistics
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PSSM-Id: 280494
Aligned: 3 rows
Threshold Bit Score: 712.999
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DNV_A     2 SLPGTGSGTSSGGgnTQGQDVYIIPRPFSNFGKKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVN-----RLLTTCLAEI 76 
AAF04301 142 KLPGTAKPQSLEG--TGDRSIVYLERPINPKNIVITTYKKQHKLLTFGIASKILNQKIAAVDNVNpahviYFLTTALAEV 219
Q90053   375 SLPGTGSGTSSGGgnTSGQEVYVIPRPFSNFGKKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVN-----RLITTCLAEI 449 Junonia coenia dens...
1DNV_A    77 PWQKLPLYMNQSEFDLLPPGSRVVECNVKVIFRTNRIAFETSSTVTKQATLNQISNVQTAIGLNKLGWGINRAFTAFQSD 156
AAF04301 220 PVHKPVLYMNQSEYDLLPVGAEVLQVKVSVVQRNALLSFQTNASSTSLATLNQNKNGVYCIGLNKTGYGTNRRYTAFNAT 299
Q90053   450 PWQKLPLYMNQSEFDLLPPGSRVVECNVKVIFRTNRIAFETSSTATKQATLNQISNLQTAVGLNKLGWGIDRSFTAFQSD 529 Junonia coenia dens...
1DNV_A   157 QPMIPTATTAPKYEPVtgDTGYRGMIADYYGADStNDTAFgnAGNYPHHQVSSFTFLQNYYCMyQQTNQGTGGWPCLAEH 236
AAF04301 300 EKMIPEKCGPPVYAAV--AEGYEGMLEDLYGVNN-NVASF--VTSLPKHQVGMYTTLKNYFCM-TQTSLYTGGWPNLQSK 373
Q90053   530 QPMIPTATSAPKYEPItgTTGYRGMIADYYGADStNDAAFgnAGNYPHHQVGSFTFIQNYYCMyQQTNQGTGGWPCLAEH 609 Junonia coenia dens...
1DNV_A   237 LQQFDSKTVNNQCLIDVTYKPKMGLIKSPLNYkiigQPT----------VKGTISVGDNLVNMrgavvtNPPEATQNVAE 306
AAF04301 374 VVEYDAAAVVGEPILTYVYQPKIAPLKPVQKY----LPTqlpyrfsseyVHGTLQSGFEVMTK------NNTDTTKDVSY 443
Q90053   610 LQQFDSKTVNNQCLIDVTYKPKMGLIKPPLNYkiigQPT----------AKGTISVGDNLVNMrgavviNPPEATQSVTE 679 Junonia coenia dens...
1DNV_A   307 STHNLTRNFPADlFNIYSDIEKSQVLHKGPWGHENPQIQPSVHIGIQAVPALTTGALL---INSsplnSWTDSMGYIDVM 383
AAF04301 444 SSSNPRANIDMS-FDIYTDIEKSQCMVRGIGGNMTPQIQPSLHIGINPVPALTTAAITggdTNS----SFTDTRSYFDVT 518
Q90053   680 STHNLTRNFPANlFNIYSDIEKSQILHKGPWGHENPQIQPSVHIGIQAVPALTTGALL---VNSsplnSWTDSMGYIDVM 756 Junonia coenia dens...
1DNV_A   384 SSCTVMEAQPTHFPFSTEANTNPGNTIYRIN---LTPNSLTSAFNGLYGNGA 432
AAF04301 519 CECVVGYRTYTDRPFASEYNCAAGEEIRGHNgksLPFDSNTVPFAGLYVNAS 570
Q90053   757 SSCTVMESQPTHFPFSTDANTNPGNTIYRIN---LTPNSLTSAFNGLYGNGA 805 Junonia coenia densovirus pBRJ/1990
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