1FNN


Conserved Protein Domain Family
CDC6

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COG1474: CDC6 (this model, PSSM-Id:224391 is obsolete and has been replaced by 441083)
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
linked to 3D-structure
Statistics
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PSSM-Id: 224391
Aligned: 41 rows
Threshold Bit Score: 145.571
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FNN_A     1 MAIVVDDSVFSPSYVPKR-------LPHREQQLQQLDIL---------LGNWLRNPGHH--------------------- 43  Pyrobaculum aerophilum
19173061   1 -----------------------mvVAGREEEYLKLERY---------LDMFFSTGAGG--------------------- 27  Encephalitozoon cun...
19173142     --------------------------------------------------------------------------------     Encephalitozoon cun...
1168808   84 PAQLKENKKPKLPTTPQTp-----kTPKRTIQIVTPKSLnrtc-npvpFATRLLQSTPHrqlfpptpstpstpsynstak 157 fission yeast
1709487  108 RAYAKRMEIKPEYLLPDRhinevyvSCGRDENLTSCIIEhcnvyseaeFFSKFPAGIPTkrkdlfpcnffirrgvhlk-- 185 fission yeast
13541527     --------------------------------------------------------------------------------     Thermoplasma volcanium
13542297   6 KIDISKLKTGFLGKFPSHq-----lSRILSSEPDRLT------------------------------------------- 37  Thermoplasma volcanium
13542308  16 AKETSNIKSAIIFDMDFKp-----pRILIRSELNKVTND---------LADYVNLNLPR--------------------- 60  Thermoplasma volcanium
16120131     --------------------------------------------------------------------------------     Halobacterium sp. N...
729078    58 TKALLQKSSELVNLNSSDg-----aLPARTAEYEQVMNF---------LAKAISEHRSD--------------------- 102 baker's yeast
1FNN_A    44 --------------------------------YprATLL------------GRPGTGK-------TVTLRKLWELYKDKT 72  Pyrobaculum aerophilum
19173061  28 -----------------------------------IVYVs-----------GVPGSGK-------THTILRLMEERKIP- 53  Encephalitozoon cun...
19173142     --------------------------------------------------------------------------------     Encephalitozoon cun...
1168808  158 lslrksyrsagvvgreneksivesffrqhldaNagGALYv----------sGAPGTGK-------TVLLHNVLDHVVSDY 220 fission yeast
1709487  186 -------------vnkytepldwsyyahnlerIedLLVEmeenlrptkkksGSRGRGRprkyplpNVESKESSSKVNSKD 252 fission yeast
13541527     --------------------------------------------------------------------------------     Thermoplasma volcanium
13542297  38 -------------------------------------------------------------------EPEFLAKALKENK 50  Thermoplasma volcanium
13542308  61 --------------------------------H--IIIY------------GSKGSGK-------TLSALTIASAFKESK 87  Thermoplasma volcanium
16120131     --------------------------------------------------------------------------------     Halobacterium sp. N...
729078   103 --------------------------------S--LYIT------------GPPGTGK-------TAQLDMIIRQKFQSL 129 baker's yeast
1FNN_A    73 TAR----------------------------------FVYINGFIYRNFTAIIGEIARSLNi------------------ 100 Pyrobaculum aerophilum
19173061  54 -------------------------------------HLFLNATRLRSRREVYGWILT---------------------- 74  Encephalitozoon cun...
19173142     --------------------------------------------------------------------------------     Encephalitozoon cun...
1168808  221 PKVn---------------------------------VCYINCMTINEPKAIFEKIHSKIVk------------------ 249 fission yeast
1709487  253 ENFdlqddsessednltiqpqtprrrhkrsrhnssnlASTPKRNGYKQPLQITPLPIRMLSleefqgsphrkaramlhva 332 fission yeast
13541527     --------------------------------------------------------------------------------     Thermoplasma volcanium
13542297  51 YVP----------------------------------YYYINVRENPTSIKIYRYVTK---------------------- 74  Thermoplasma volcanium
13542308  88 SIP----------------------------------FFYVNARENPTSIKIYRKLTR---------------------- 111 Thermoplasma volcanium
16120131     --------------------------------------------------------------------------------     Halobacterium sp. N...
729078   130 PLSlstprskdvlrhtnpnlqnlswfelpdgrlesvaVTSINCISLGEPSSIFQKIFDSFQd------------------ 191 baker's yeast
1FNN_A   101 ------------------------------------------------------------PFPRR---------GLSRDE 111 Pyrobaculum aerophilum
19173061  75 ------------------------------------------------------------NLPCC---------SDRRCM 85  Encephalitozoon cun...
19173142   1 ---------------------------------------------------------------------------MASLE 5   Encephalitozoon cun...
1168808  250 -----------------------------------------------------------eEILEN---------EDHHIN 261 fission yeast
1709487  333 svpstlqcrdnefstifsnlesaieeetgaclyisgtpgtgktatvheviwnlqelsregQLPEFsfceingmrVTSANQ 412 fission yeast
13541527     --------------------------------------------------------------------------------     Thermoplasma volcanium
13542297  75 --------------------------------------------------------------IS-----------NRDND 81  Thermoplasma volcanium
13542308 112 --------------------------------------------------------------ID-----------SRGHD 118 Thermoplasma volcanium
16120131     --------------------------------------------------------------------------------     Halobacterium sp. N...
729078   192 -----------------------------------------------------------lNGPTL---------QIKNMQ 203 baker's yeast
1FNN_A   112 FLALLVEHLRE----RDLYMFLVLDDAFNLAPD----------ILSTFIRLGQEAdk----------lgAFRIALVIVGH 167 Pyrobaculum aerophilum
19173061  86 GLSHLRQHFIE----CASLHVVVIDEVDILVGRsq-------eVLYNIFDMPYLE--------------GSKLLLFVVSN 140 Encephalitozoon cun...
19173142   6 DLKRLYDSFSC----SGASVYLREEETLAIRSFlgs-----ksPVLHICGSPGTG--------------KTHVTVHTVGN 62  Encephalitozoon cun...
1168808  262 FQCELESHFTQsaneLYNPVIIVLDEMDHLIAReq-------qVLYTLFEWPSRP--------------TSRLILVGIAN 320 fission yeast
1709487  413 AYSILWESLTG----ERVTPIHAMDLLDNRFTHaspnrsscvvLMDELDQLVTHNqkvlynffnwpslpHSRLIVVAVAN 488 fission yeast
13541527   1 -------------------------------------------------MDFKPN------------------RILIRKE 13  Thermoplasma volcanium
13542297  82 IDEVKNKFDSF----LYGKSIVILDEVDFLQDYd---------VLYHITRHTKAN------------------LILLTQK 130 Thermoplasma volcanium
13542308 119 IDEVKSKFDSM----LSGKSIVILDEVDFLQDYd---------ILYHLTRHTRAN------------------LILLTQK 167 Thermoplasma volcanium
16120131   1 --------------------------------------------------------------------------MVKGTP 6   Halobacterium sp. N...
729078   204 HLQKFLEPYHK-----KTTFVVVLDEMDRLLHAntset-qsvrTILELFLLAKLP--------------TVSFVLIGMAN 263 baker's yeast
1FNN_A   168 NDAV-LNNLDPSTRGIMGKYV--IRFSPYTKDQIFDILLDRAKAG-------------------------------LAEG 213 Pyrobaculum aerophilum
19173061 141 TMNLpEKLFEPKVCSRIGGRR--INFMPYTSAQLCTVVGDCGMDR----------------------------------- 183 Encephalitozoon cun...
19173142  63 SFLYlNYYNENDIFGRIKSSN----TSVVIIDEFDKYYNERRNEC-------------------------------IQAM 107 Encephalitozoon cun...
1168808  321 ALDM-TDRFLPRLRTKHITPKl-LSFTPYTAQEISTIIKARLKTAattseknnpftpiksisevsddsinvvsqhaDETP 398 fission yeast
1709487  489 TMDLpERILSNRISSRLGLSR--VPFEPYTHTQLEIIIAARLEAV-------------------------------RDDD 535 fission yeast
13541527  14 LDKV-TNDLAEYVNLHLPRHI--IIYGSKGSGKTLSALIMVEALK-------------------------------ESLP 59  Thermoplasma volcanium
13542297 131 VYWY-MDTNDESVKSSLQPDH--IVFYEYSSDEIREILKMRADEG-------------------------------LNKY 176 Thermoplasma volcanium
13542308 168 VYWY-KDMNDESVKSSLQPDH--IVFHEYSSEEIREILKMRADEG-------------------------------LNKY 213 Thermoplasma volcanium
16120131   7 LSGKsLLFALTRLDRNNPEKE---WFRTSEIHEVYQTVARDVEVEp------------------------------KGYN 53  Halobacterium sp. N...
729078   264 SLDM-KDRFLSRLNLDRGLLPqtIVFQPYTAEQMYEIVIQKMSSLptiifq--------------------pmaikFAAK 322 baker's yeast
1FNN_A   214 SYSEDILQMIADITGAQTPldtnrgDARLAIDILYRSAYAAQQNGRKHIAPEDVRKS--SKEVLFGISEEV--LIGLPLH 289 Pyrobaculum aerophilum
19173061 184 ----GCVELVSKRIGAISG------DVRKVKDVIDRVKESKGEENAGILDVDGVMRK-----MYTPVYVHY--LQGLSFY 246 Encephalitozoon cun...
19173142 108 CYLRTRQKLITISNDLTISg-----DVLFFKPYSSSDMEKILTQKVSEESSSPILNPtaIKIISKRVGPSGdlRQLLRYV 182 Encephalitozoon cun...
1168808  399 FIHPAAIELCARKVAASSG------DLRKALDICRHAIELAEREWKAQHDNTLSSVDipRASIAHVVRATS--AMSQSAS 470 fission yeast
1709487  536 VFSSDAIRFAARKVAAVSG------DARRALDICRRASELAE-NKNGKVTPGLIHQA--ISEMTASPLQKV--LRNLSFM 604 fission yeast
13541527  60 Y------------------------------------------------------------------------------- 60  Thermoplasma volcanium
13542297 177 DPDSLGLLSAMLVRNYRS-------DARIGIKALEIIGRMNEWDDDSVRTALKQAYV--EVEGETLKNLGD--RDLLILA 245 Thermoplasma volcanium
13542308 214 DKESLGLLSAMLVRDYRS-------DARIGIKALEIIGRLNEWDDDSVRAALKQAYV--EVEGETLKNLGD--RDLLILA 282 Thermoplasma volcanium
16120131  54 RALELLNKHVTTGVLESKK------KERGDQGKFRSYSLQGDVESTRTGLINSTPEL--QTLMGW--------------- 110 Halobacterium sp. N...
729078   323 KCAGNTGDLRKLFDVLRGSieiyelEKRFLLSPTRGSLNSAQVPLTPTTSPVKKSYPepQGKIGLNYIAKV--FSKFVNN 400 baker's yeast
1FNN_A   290 EKLF---------LLAIVRSLkis--htPYITFGDAEESYKIVCEEYGErp---rVHSQLWSYLNDLREKGIVE-TRQNK 354 Pyrobaculum aerophilum
19173061 247 QKII---------VTLVSESRe------DRMKVRELYDELASFCRRSGMke---vGFFEYSDLVEMLVGCGVLG-YRNSG 307 Encephalitozoon cun...
19173142 183 QEIV---------GKKIVEGGa------VEISPEDVFPEKESTEERPSN--------VHHSIISSLISGNKRVSkMELYS 239 Encephalitozoon cun...
1168808  471 ARLKnl------gLQQKAILCtlvvcekTSLSVADVFEKYSSLCLRDRLiy--plTSSEFCDVANSLETLAIIR-LRTKQ 541 fission yeast
1709487  605 QKVF---------LCAIVNRMr-----rSGFAESYVYEVLEEAERLLRVmtt-pdAEAKFGELILRRPEFGYVL-SSLSE 668 fission yeast
13541527     --------------------------------------------------------------------------------     Thermoplasma volcanium
13542297 246 ALIK---------NQDTNRA--------YSEVSASSNLLLRGVSKSTFF------------------------------- 277 Thermoplasma volcanium
13542308 283 ALIK---------NQDTNRA--------YSEVSASGNMLLRGVSKSTFFqsvnylQNLGLITLIKKKIGRYYTM-ESQIL 344 Thermoplasma volcanium
16120131     --------------------------------------------------------------------------------     Halobacterium sp. N...
729078   401 NSTRtriaklniqQKLILCTIiqslklnSDATIDESFDHYIKAITKTDTla--plQRNEFLEICTILETCGLVS-IKKTK 477 baker's yeast
1FNN_A   355 RGegVRGRTTLISIGTEPlDTLEAVITKLIKE 386 Pyrobaculum aerophilum
19173061 308 KEvlAMVLREEVDRSLGSdGEYLEIVRRIGIR 339 Encephalitozoon cuniculi
19173142 240 RYlkECQEMEISSYDRTDfNIIYDIYA----- 266 Encephalitozoon cuniculi
1168808  542 RN--GKPQDRIISLLVPEmDVITAVGDIGTLK 571 fission yeast
1709487  669 NGv-LYLENKSSRNARVRlAIADDEIKLAFRG 699 fission yeast
13541527     --------------------------------     Thermoplasma volcanium
13542297     --------------------------------     Thermoplasma volcanium
13542308 345 LSd-ESIVLGELRKRI---------------- 359 Thermoplasma volcanium
16120131     --------------------------------     Halobacterium sp. NRC-1
729078   478 CKgkTKRFVDKIDVDLDMrEFYDEMTKISILK 509 baker's yeast
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