3DPL,2LGV,1LDJ,1U6G,4A0C,4P5O,3DQV


Conserved Protein Domain Family
mRING-H2-C3H2C2D_RBX1

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cd16485: mRING-H2-C3H2C2D_RBX1 (this model, PSSM-Id:319399 is obsolete and has been replaced by 438148)
Click on image for an interactive view with Cn3D
modified RING finger, H2 subclass (C3H2C2D-type), found in RING-box protein 1 (RBX1) and similar proteins
RBX1, also known as Hrt1, protein ZYP, RING finger protein 75 (RNF75), or regulator of cullins 1 (ROC1), is an E3 ubiquitin-protein ligase necessary for ubiquitin ligation activity of the multimeric cullin (Cul)-RING E3 ligases (CRLs). RBX1-containing CRLs are involved in NEDD8 pathway and RBX1 specifically regulate NEDD8ylation of Cul1-4. It can also bind and activate HIV-1 Vif-Cullin5 E3 ligase complex in vitro. Moreover, RBX1 is an essential element of Skp1/Cullins/F-box (SCF) E3-ubiquitin ligase complex that targets diverse proteins for proteasome-mediated degradation. It is a direct functional target of miR-194 and plays an important role in proliferation and migration of gastric cancer (GC) cells. RBX1 is also an essential component of KEAP1/CUL3/RBX1 E3-ubiquitin ligase complex that functions as a regulator of NFE2-related factor 2 (NRF2) and plays a key role in NRF2 pathway deregulation in multiple tumor types, including ovarian carcinomas (OVCA) and papillary thyroid carcinoma (PTC). Furthermore, RBX1 associates with DDB1, Cul4A, and Fbxw5 to form the Fbxw5-DDB1-Cul4A-Rbx1 complex that may function as a dual SUMO/ubiquitin ligase suppressing c-Myb activity through sumoylation or ubiquitination. RBX1 contains a C-terminal modified RING-H2 finger that is C3H2C2D-type, rather than the canonical C3H2C3-type. The modified RING-H2 finger is essential for its ligase activity.
Statistics
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PSSM-Id: 319399
Aligned: 57 rows
Threshold Bit Score: 103.988
Created: 2-May-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding sitepolypeptidemodified
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:2LGV; Homo sapiens RBX1 binds three Zn2+ ions through its modified RING-H2 finger.
  • Comment:Homo sapiens RBX1 contains a third Zn2+-binding site, in addition to the two Zn2+ ions of the canonical RING-H2 finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       #  #       #  #            #      # #  # ##          #  #    
3DPL_R     38 DNCAICRNHIMDLCIECQAnqas-atseECTVAWGVCNHAFHFHCISRWLKTRqvCPLDNREW 99  human
2LGV_A     32 DNCAICRNHIMDLCIECQAnqas-atseECTVAWGVCNHAFHFHCISRWLKTRqvCPLDNREW 93  human
CUG54892   71 DTCAICRNHIMDLCIECQAnqqs-gpaeECTVAWGTCNHAFHFHCISRWLKTRqvCPLDNKEW 132 Bodo saltans
Q38C61     39 DTCAICRNHVMDLCIECQAssng--prtNCNIAWGVCNHAFHTHCISRWLKTRnvCPLDNKEW 99  Trypanosoma brucei
Q9NHX0     55 DNCAICRNHIMNLCIECQAdpna--nqdECTVAWGECNHAFHYHCIARWLKTRlvCPLDNKEW 115 fruit fly
Q08273     53 DNCAICRNHIMEPCIECQPkamt-dtdnECVAAWGVCNHAFHLHCINKWIKTRdaCPLDNQPW 114 Saccharomyces cerevisiae S288c
CAK91442   27 DNCAICKNHIMEKCIECDAqeg----qgECIVAWGTCNHAYHFHCIERWLKNRqtCPLDNRNW 85  Paramecium tetraurelia
Q8SWJ6     25 ETCAICRNHIMDTCVECQNgmt---nngECKVSWGVCNHAFHTHCITRWLSSKnvCPLDTKKW 84  Encephalitozoon cuniculi
EAL52032   27 DTCAICRNSLMELCLECQGntgs--tteECTVSWGTCNHAFHTHCISSWLRQRavCPLDLKQW 87  Entamoeba histolytica HM-1:IMSS
ALD08342   57 DTCAICRNNLYEPSIEYQAnptgdpdhpGLSIAWGVCGHVFHLDCIQRWLKTRsaCPLCNKEW 119 Dunaliella salina

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