2JHP,2JHP


Conserved Protein Domain Family
Orbi_VP4

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pfam05059: Orbi_VP4 (this model, PSSM-Id:282862 is obsolete and has been replaced by 461538)
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Orbivirus VP4 core protein
Orbiviruses are double stranded RNA retroviruses of which the bluetongue virus is a member. The core of bluetongue virus (BTV) is a multienzyme complex composed of two major proteins (VP7 and VP3) and three minor proteins (VP1, VP4 and VP6) in addition to the viral genome. VP4 has been shown to perform all RNA capping activities and has both methyltransferase type 1 and type 2 activities associated with it.
Statistics
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PSSM-Id: 282862
Aligned: 2 rows
Threshold Bit Score: 1384.39
Created: 20-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JHP_A   3 EPHAVLYVTNELSHIVKDGFLPIWKLTGDESLNDLWLENGKYATDVYAYGDVSKWTIRQLRGHGFIFISTHKNVQLADII 82  Bluetongue virus (ser...
2JHP_A   3 EPHAVLYVTNELSHIVKDGFLPIWKLTGDESLNDLWLENGKYATDVYAYGDVSKWTIRQLRGHGFIFISTHKNVQLADII 82  Bluetongue virus (ser...
2JHP_A  83 KTVDVRIPREVARSHDMKAFENEIGRRRIRMRKGFGDALRNYAFKMAIEFHGSEAETLNDANPRLHKIYGMPEIPPLYME 162 Bluetongue virus (ser...
2JHP_A  83 KTVDVRIPREVARSHDMKAFENEIGRRRIRMRKGFGDALRNYAFKMAIEFHGSEAETLNDANPRLHKIYGMPEIPPLYME 162 Bluetongue virus (ser...
2JHP_A 163 YAEIGTRFDDEPTDEKLVSMLDYIVYSAEEVHYIGCGDLRTLMQFKKRSPGRFRRVLWHVYDPIAPECSDPNVIVHNIMV 242 Bluetongue virus (ser...
2JHP_A 163 YAEIGTRFDDEPTDEKLVSMLDYIVYSAEEVHYIGCGDLRTLMQFKKRSPGRFRRVLWHVYDPIAPECSDPNVIVHNIMV 242 Bluetongue virus (ser...
2JHP_A 243 DSKKDILKHMNFLKRVERLFIWDVSSDRSQMNDHEWETTRFAEDRLGEEIAYEMGGAFSSALIKHRIPNSKDEYHCISTY 322 Bluetongue virus (ser...
2JHP_A 243 DSKKDILKHMNFLKRVERLFIWDVSSDRSQMNDHEWETTRFAEDRLGEEIAYEMGGAFSSALIKHRIPNSKDEYHCISTY 322 Bluetongue virus (ser...
2JHP_A 323 LFPQPGADADMYELRNFMRLRGYSHVDRHMHPDASVTKVVSRDVRKMVELYHGRDRGRFLKKRLFEHLHIVRKNGLLHES 402 Bluetongue virus (ser...
2JHP_A 323 LFPQPGADADMYELRNFMRLRGYSHVDRHMHPDASVTKVVSRDVRKMVELYHGRDRGRFLKKRLFEHLHIVRKNGLLHES 402 Bluetongue virus (ser...
2JHP_A 403 DEPRADLFYLTNRCNMGLEPSIYEVMKKSVIATAWVGRAPLYDYDDFALPRSTVMLNGSYRDIRILDGNGAILFLMWRYP 482 Bluetongue virus (ser...
2JHP_A 403 DEPRADLFYLTNRCNMGLEPSIYEVMKKSVIATAWVGRAPLYDYDDFALPRSTVMLNGSYRDIRILDGNGAILFLMWRYP 482 Bluetongue virus (ser...
2JHP_A 483 DIVKKDLTYDPAWAMNFAVSLKEPIPDPPVPDISLCRFIGLRVESSVLRVRNPTLHETADELKRMGLDLSGHLYVTLMSG 562 Bluetongue virus (ser...
2JHP_A 483 DIVKKDLTYDPAWAMNFAVSLKEPIPDPPVPDISLCRFIGLRVESSVLRVRNPTLHETADELKRMGLDLSGHLYVTLMSG 562 Bluetongue virus (ser...
2JHP_A 563 AYVTDLFWWFKMILDWSAQNREQKLRDLKRSAAEVIEWKEQMAERPWHVRNDLIAALREYKRKMGMREGASIDSWLELLR 642 Bluetongue virus (ser...
2JHP_A 563 AYVTDLFWWFKMILDWSAQNREQKLRDLKRSAAEVIEWKEQMAERPWHVRNDLIAALREYKRKMGMREGASIDSWLELLR 642 Bluetongue virus (ser...
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