Conserved Protein Domain Family
Vesiculo_matrix

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pfam06326: Vesiculo_matrix 
Vesiculovirus matrix protein
This family consists of several Vesiculovirus matrix proteins. The matrix (M) protein of vesicular stomatitis virus (VSV) expressed in the absence of other viral components causes many of the cytopathic effects of VSV, including an inhibition of host gene expression and the induction of cell rounding. It has been shown that M protein also induces apoptosis in the absence of other viral components. It is thought that the activation of apoptotic pathways causes the inhibition of host gene expression and cell rounding by M protein.
Statistics
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PSSM-Id: 283887
Aligned: 2 rows
Threshold Bit Score: 345.266
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P03519   1 MSSLKKILGLKGKGKKSKKLGIA-----------PPPYeedtsmeyapsapidksyFGV--DEMDTYDpNQLRYEKFFFT 67  Vesicular stomatitis ...
Q9E785   1 MLTLFKKGKPKGGSVDDRNSSYResdpmlvwgtaPPAY------------------LDVyhDERDKNE-LQFNTKSYLIQ 61  Bovine ephemeral feve...
P03519  68 VKMTVRSNRPFRTYSDVAAAVSHWDHMYIGMAGKRPFYKILAFLGSSNLKATPAvlADQGQPEYHTHCEGRAYLPHRMGK 147 Vesicular stomatitis ...
Q9E785  62 ANLEVISSKPIERTTEMLKVLDVMVDEYDGSYLSKALIITSYLTIGTHLRRMMS--SVKNNHKYNNGFTEVIEFTGTAEI 139 Bovine ephemeral feve...
P03519 148 TPpmLNVPEHFRRPFNIGLYKGTIELTMTIYDDESLEAAPMIWDHF-----NSSKFSDFREKALMFGLIVEKKASGAWVL 222 Vesicular stomatitis ...
Q9E785 140 HP--RDQEIKYNKYLMTSHMGEPVSISYQFSGKKSKRRGKNILDAYnlelgNGSKPPDLKDLLESYEINLCYNLKGEHGF 217 Bovine ephemeral feve...
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