Conserved Protein Domain Family
PRK04342

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PRK04342: PRK04342 
DNA topoisomerase IV subunit A
Statistics
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PSSM-Id: 235287
Aligned: 94 rows
Threshold Bit Score: 370.383
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
297527444   7 MVISSIDKLARDKSIEILRKKFRSLAKRIIEGKRPVLVMPKR-ILSNTIYDEKNKLLLLGPEMQRRSFLDVNEARKFMQT 85 
14591345    1 -----------------------------------------------------------------------------MQT 3  
242399083   5 EKPKERFSYDPKKVLQQLERFGKKVLEEITRGRNPFIDVPTR-GLSNVYFDERDRLIKMGDKTSRRYLFHVAHARKFMQT 83 
240103483  10 EKPKEKFSYDPKKVLSKLEEYGRSVLEAIKSGKNPYFDIPMR-GLNNVYFDEKSRLIKMGDKLSRRYFLNVAHARKFMQT 88 
57640733    9 ERPKEKFSYDPRKVLKMLDEHARRILEDIKAGKNPHFDIPMR-GLSNVYFDEKSRLIKMGDKLSRRYFLNVAHARKFMQT 87 
212223912  10 SQPRERFSYDPTKVLNKLEEYGRRVLEDIKSGKNPYFDIPMR-GLSNVYFDEKRRVIKMGDKLSRRYFLNVAHARKFMQT 88 
147920485   5 ILKERRLTRDQERSIKVLSAYCLGAVIRAENALPYTFKALKV-DRASVEYDDVEGYSTSGDTLSMTTA-NIDQAASLAKL 82 
41615325    1 -----------MDILQKLKQLGEKIYNEFLKNGDPRIEFLTRgNIKTVEYDEEKDIIKLKEKQSVRRFFDVGETRRFTQT 69 
170291065   1 ------MRMSANDVKSKVLEIAREVAKAIKEGRFPELEYPPN-TQRNIVFDERMGYIFRPTFYGKIKGSHSKSLRTLSGV 73 
282162710   7 ILRDRRLTRDQEQAIMILSAYCLGSMVRVENALPYTFKALKV-DRSSVEYDDVDGYNVTGDTVAMSTA-NIDQAATIAKL 84 
297527444  86 LLMASIIYEALANNEYPTIRDLYYRGKHTIIyrdlhgrTHHENTW-DEQRESDSVIRDLEVYLGVLREEMLILSKEKGKV 164
14591345    4 LILMAYIKRLVSEGKHASLREAYYANKHTVP-------GTRENTF-EDQSESDPIIEDLERMLGVLREEMHITADRRGYI 75 
242399083  84 LLISAYIKRLVSEGKHASLREAYYANKHTIP-------GSKENTF-EDQSESDPIIEDLERMFGVLREEMHITADRRGYI 155
240103483  89 LLIMAYVKRLVSEGKHASLREAYYANKHTIP-------GTRENTF-EDQRESDPIIEDLERMLGVLREEMHITADRRGYI 160
57640733   88 LLIMAYVKRLVSEGKHASLREAYYANKHTIP-------GTRENTF-EDQSESDPIIEDLERMFGVLREEMHITADRRGYI 159
212223912  89 LLIMAYVKRLVSEGKHASLREAYYANKHTIP-------GTKENTF-EDQRESDPIIEDLERMLGVLREEMHLTADRRGYI 160
147920485  83 QFLINHVIETIVANSVSTKRDCYYMLKNQFQkypw--------mdlTGQGESDRLIDTLERIIRLNRENLNVIADPKGLI 154
41615325   70 LLVAALAKELVESNKHASLREVYYQLKHTIP-------YINENTF-DEQSESDSVIEDLERALRAIREQFGIVADRKGYL 141
170291065  74 LYGMSRALDHLENGLTMTKRDFYYLHKVE---------RLKGTLFpEDQRETDARIILMELILGMPREAFSITSDPRGWI 144
282162710  85 QFLVNHVIETVAANSVSTKRDCYYMLKNQFQkypw--------mdlSGQGESDRLIDTLERIIRMQRENLNIIADPKGLI 156
297527444 165 VGNLVIKS-GDd-TIDLSK-MGHGAYSIEPTPDLIEFKDVDAEYVLVVEKDAVFQQLHRHGFWKKQKAILITSAGQPDRA 241
14591345   76 YGDIVIKD-GEd-EFNASK-LGTGGWAVPGTVEHIQFPEINVDYVLVVETAAMADRLIEEKYPKRENCLIVATQGQASRG 152
242399083 156 YGDVVIKD-GEd-EFNASK-LGMGGWAVPGTVEHIEFPEINVDYVLVVETAAMADRLIEEKYPKKEKALVVATQGQASRG 232
240103483 161 YGDIVIRD-GEd-EFNASK-LGSGGWAVPGTVEHIQFPEINVDYALVVETAAMADRLIEEKFPKKENALIIATQGQASRG 237
57640733  160 YGDIVIRD-GEd-EFNASR-LGSGGWAVPGTVEHIQFPEINVDYALVVETAAMADRLIEEKFPKRENALIIATQGQASRG 236
212223912 161 YGDIVIRD-GEd-EFNTSK-LGMGGWAVPGTVEHLQFVEVNVDYALVVETAAMADRLIEEKFPKKENALIIATQGQASRG 237
147920485 155 YGDITIVD-----EEGTEFtCGEREQSITGFAGQWEIKKYGVKAVIPIEKTGVFMDLKKLKVADELNIGLVHLGGQPARG 229
41615325  142 YGDITLKDrNRgdEWNCSK-LGLGGWGIPSTIEEIDIVDVNADYVLVVEKDAMFERLIEERFPEKNRALLIATKGQPSRG 220
170291065 145 YGDIELIDrSGr-VLKADQ-VGEMGYSVPPRPENIKFKRIGVKAVVAVEKVGPAKNMIELGIPEEKKIAIAILQGQASRS 222
282162710 157 YGDITLVDeEGk-EFNCHE-REQGITGLAGQWEV---KSHHVKAVIAIEKTGVFMDLKKLKVADELGIGLIHLGGQPARG 231
297527444 242 TRRFVRRLNEELKLPIYILADADPYGWYIYSVFKIGSITLSYESERLATPSAKFIGVTMTDVFGDeiirkkikdlksikt 321
14591345  153 VRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEY--------------- 217
242399083 233 VRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKY--------------- 297
240103483 238 VRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEARFVGMTMDDIKRY--------------- 302
57640733  237 VRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPESKFVGMTMDDIKKY--------------- 301
212223912 238 VRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIERY--------------- 302
147920485 230 CRALIKLLSEK-GIPIGVLTDFSPWSGMIAKSVMSGSINAAHLSG-LHASKAAFLGIESADVDTWlk------------- 294
41615325  221 TRRLIRKLRYEVGLPVYVFTDGDPWGFYIYSVIKRGSMNLAMFSEQLATPDAKFIGLTIDDVIKY--------------- 285
170291065 223 MRRFLRMLSDE-GVPLAVLTDLSPWSLRIAATVIYNSINSAHIPH-LATPEARFIGILTRDVEEGff------------- 287
282162710 232 CRALINLLSEK-GIPIGVLTDLSPWSGMIAKSVLSGSIAAAHLSG-LHASKAAFLGIESSDVDDWlk------------- 296
297527444 322 issstlrklprkkpylteqERRNYIIKAKPK----------DIERAIELIgydvakacldnkeliknkklkdkikkkegl 391
14591345  218 -------------------NLENVTEKLKGIppdkkggptgDYKRLIEEL------------------------------ 248
242399083 298 -------------------GLENVTEKLKGIppnkkggptgDYKRIIEEM------------------------------ 328
240103483 303 -------------------GLENVTEKLKGIppnkkggptgDYKRILEEM------------------------------ 333
57640733  302 -------------------GLENVTEKLKGIppnkkggptgDYKRILEEM------------------------------ 332
212223912 303 -------------------GLKNVTEKLKGIppnkkggptgDYKRIIEEM------------------------------ 333
147920485 295 ------------------dVWKSVQEPLSKN----------DLLRAQNNL------------------------------ 316
41615325  286 -------------------DLKDVAIQLKPI----------DVKRVKELM------------------------------ 306
170291065 288 ------------------kDYKFALEPLTQA----------DYKAALDNK------------------------------ 309
282162710 297 ------------------dVWKSVQEPLSGH----------DTARAQNNL------------------------------ 318
297527444 392 aGYPWFRTPEWIRELCIFFKTLSKLEIEAM-----ASKGLKFLADKYIPEKISVGDWID 445
14591345  249 -NYPWFQDKEWQRQLKLALKWGVRIEQQAL-----ANKSLEFVAKEYLPEKIREGKLLP 301
242399083 329 -NYPWFQNKEWQRQLKLALEWGVRIEQQAL-----ANKSLEFVAKEYLPEKIGNEELLP 381
240103483 334 -EYPWFQNREWQRQLKLALKWGVRIEQQAL-----ANKSLEFVAKEYLPEKINSGDLLP 386
57640733  333 -NYPWFQNKEWQRQLQLALKWGVRIEQQAL-----ANKSLEFVAKEYLPEKINNGDLLP 385
212223912 334 -NYPWFQNKEWQRQLQLALKMGVRIEQQAL-----ANKSLEFVAKKYLPEKINNGELLP 386
147920485 317 -SLPYMQDDYWKGENEWFVRHARKTELEALgtaagSPLKKKEFYKSYLRAKLREKLKVR 374
41615325  307 -EYPWFKNKEWQRQFNKMLKLNIKAEQDAL-----AKHSLEFVANKYLPEKIEKGEFLP 359
170291065 310 -SLPNLQNEFWQKENDWFLQNKKKAELEIFkamspSAKTLKEYFIRYLSEKLEQHLGVS 367
282162710 319 -SLPYMQDDYWKGENSWFVKSGKKTELEALgtaagSPLKRKEFYKKYLRAKLKEKLKVK 376
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