6GEN,6GEN


Conserved Protein Domain Family
TIP49

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pfam06068: TIP49 
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TIP49 P-loop domain
This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases.
Statistics
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PSSM-Id: 399217
Aligned: 15 rows
Threshold Bit Score: 497.217
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GEN_U    19 LIAAHSHITGLG------LDENL--------------------------------------------------------- 35  Saccharomyces cerev...
Q8IIU3    18 RVNIHSHIKGLGvntniyLHENE--------------------------------------------------------- 40  Plasmodium falcipar...
Q9GZH2    17 RTSVHSHITGLG------LNDRL--------------------------------------------------------- 33  Caenorhabditis elegans
Q8SU27    11 RINLHSHIAGLG------CDGD---------------------------------------------------------- 26  Encephalitozoon cun...
OCA39313  14 RIATHSHVKGLG------LDENG--------------------------------------------------------- 30 
Q9C0X6    15 RITTHSHIKGLG------LKEDG--------------------------------------------------------- 31  Schizosaccharomyces...
Q8WZS3    15 RTAAHTHIKGLG------LNSQG--------------------------------------------------------- 31  Neurospora crassa O...
6GEN_T    23 RTAAHTHIKGLG------LDESG--------------------------------------------------------- 39  Saccharomyces cerev...
Q8IAT2    12 RISLHSHISGLG------LDADGyvtdflfeenikkrdmyseptnkienndikngtildpdkvdnicnsyklenngnyen 85  Plasmodium falcipar...
O28462    14 RISAHSHIRGLG------LDENL--------------------------------------------------------- 30  Archaeoglobus fulgidus
6GEN_U    36 -------QPRPTSE---------GMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLG-KDVPF 98  Saccharomyces cerev...
Q8IIU3    41 -------ISLSDEKysmffdnscGLVGQFKAREASLFLVDLIKQKKLAGKCILLAGPSGSGKSALAIGISREIN-RKMPF 112 Plasmodium falcipar...
Q9GZH2    34 -------EAEYVSG---------GMVGQVAARQAAGLIVKMIQEGKIAGRALLVTGEPGAGKTAIAIAISKELG-EDTPF 96  Caenorhabditis elegans
Q8SU27    27 -------EVEYDKD---------GLVGQIKARKAMAVIRKMVESNK-GGKVVLIKGDRGSGKTALAIGLSKSLG--GVHF 87  Encephalitozoon cun...
OCA39313  31 -------MAKQAAA---------GLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG-NKVPF 93 
Q9C0X6    32 -------TCESVGG---------GFIGQEKAREACGIITDLIKSKKFGGKGVLFAGGAGTGKTALALAIAQELG-PKVPF 94  Schizosaccharomyces...
Q8WZS3    32 -------IAEKQAS---------GFVGQTTAREACGVVVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELG-TKIPF 94  Neurospora crassa O...
6GEN_T    40 -------VAKRVEG---------GFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELG-PKVPF 102 Saccharomyces cerev...
Q8IAT2    86 nkicynnISDDEDEvvknfykckGMVGQKKAREAAGIFINLIKEKNIC-KCLLLAGPSGSGKTAIAIAISKEISdESIPF 164 Plasmodium falcipar...
O28462    31 -------RAKDVAD---------GLVGQKRAREAAGVIVRLIKSGKMAGRGILMAGPPGTGKTAIAVAISKELG-KDIPF 93  Archaeoglobus fulgidus
6GEN_U    99 TAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQI---DRSIT----GGHKQGKLTIKTTDMETIYEL 171 Saccharomyces cerev...
Q8IIU3   113 VFLSGSEVYSNEIKKTEVILEAFRKSIHIKIKEEKLVYEGEVVDMVVeenECLYSlnkaKQINAIIITLKSVKGSKTLRL 192 Plasmodium falcipar...
Q9GZH2    97 VSIVASEIYSNEINKTEALTQAFRRALGIQIKEETEVLEGEVISLEV---DRSANg---MGPKVGKLTMRTTDMETIYDL 170 Caenorhabditis elegans
Q8SU27    88 NSISGTEIYSLEMSKSEAITQALRKSVGLRIKESVKVIEGEVVSL-----------------SGRRIVLKTVDMESSFEI 150 Encephalitozoon cun...
OCA39313  94 CPMVGSEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPcetENPMGgy-gKTISHVIIGLKTAKGTKQLKL 172
Q9C0X6    95 CPMVGSEVYSSEIKKTEALMENFRRAIGLRVKETKEVYEGEVTEMVPeeaENPLGgy-gKTISHVLLGLKTHKGTKQLKL 173 Schizosaccharomyces...
Q8WZS3    95 CPITGSEIYSTEVKKTEVLMENFRRAIGLKVRETKEVYEGEVTELTPeeaENPLGgy-gKTITTLLIGLKSAKGQKKLRL 173 Neurospora crassa O...
6GEN_T   103 CPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPedaENPLGgy-gKTISHVIVGLKSAKGTKTLRL 181 Saccharomyces cerev...
Q8IAT2   165 CIFNASQVYSCEVKKTEILTQYIRKSIGVKIKEIKEVFEGEVVQIEPf-fDNTYDe---QKISYVHITLKTLKEQKKIKI 240 Plasmodium falcipar...
O28462    94 VQVSASEFYSAEMKKTEALIQAMRKAIGVRIRETRTVLEGEVVGLDYnmvPNPYNpt-qKIPESATLTLATKDEKRTFSV 172 Archaeoglobus fulgidus
6GEN_U   172 GNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAmgADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRT 251 Saccharomyces cerev...
Q8IIU3   193 APKIHEQIAREKIKIGDVIYIETNTGHVKRLGRCNDYAKEYDI--EFDEYVSLPKGEVHKKKEVVQQISLHDIDLANANP 270 Plasmodium falcipar...
Q9GZH2   171 GSKMVDACLKEKVMPGDVIQVDKASGRVTRLGRSFNRSHDYDAmgPKVKLVQCPDGEIQKRRETVHTVCLHDIDVINSRT 250 Caenorhabditis elegans
Q8SU27   151 GEKMRGELDKEKVSAGDVIRIVRERGRVYKIGTSMVKRS--DVvgTDTRFVPCPEGELIRITEETQEISLHDIDVVNSKA 228 Encephalitozoon cun...
OCA39313 173 DPSIYESLQKERVEVGDVIYIEANSGAVKRQGRCDTYATEFDL--EAEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARP 250
Q9C0X6   174 DPSIYESLQREQVSTGDVIYIEANTGAVKRVGRSDAYATEFDL--EAEEYVPMPKGEVHKRKEIVQDVTLHDLDIANARP 251 Schizosaccharomyces...
Q8WZS3   174 DPSIYEAIQKERVTVGDVIYIEANTGACKRVGRSDAYATEFDL--EAEEYVPIPKGEVHKKKEIVQDVSLHDLDVANARP 251 Neurospora crassa O...
6GEN_T   182 DPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDL--ETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARP 259 Saccharomyces cerev...
Q8IAT2   241 HSSIYDNLLKEKIQEKDIIYIESHSGNVKRVGKCSLYQDMFDI--ETDTFVDLPKGNVHKKKNIIQNITLYDLDVSNVQP 318 Plasmodium falcipar...
O28462   173 GGRLAMQFFTQGIEVGDVIVIDKETGRIGKLGRSEKAKKKYDL--GDDEVVPVPSGKVEKEKEFTYVVTLHDLDEANARR 250 Archaeoglobus fulgidus
6GEN_U   252 ---QGFLALF----TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMA 324 Saccharomyces cerev...
Q8IIU3   271 tvgEDLASVLnsylRPKKTEITEKLRVEINKTVNKFLESGLAEIIPGVLYIDEAHMLDIECFSYLNRAIESPLAPILIMA 350 Plasmodium falcipar...
Q9GZH2   251 ---QGYVALF----SGDTGEIKAEVRDQINKKVLEWREEGKAKFVPGVLFIDEAHMLDIECFSFLNRAIEGELSPLIIMA 323 Caenorhabditis elegans
Q8SU27   229 ---EGYLALF----SGETGEIRAETRDEVNKKVWGWINEGKAEIVRGVLFIDEVHMLDIESFAFLNKAVEEDFCPVILVS 301 Encephalitozoon cun...
OCA39313 251 qggQDILSMMgqlmKPKKTEITDKLRAEINKVVNKYIDQGIAELVPGVLFIDEVHMLDIECFTYLHRALESSLAPIVIFA 330
Q9C0X6   252 qggQDIMSMMgqlmKPKKTEITDKLRGEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIECFTYLNQALESTISPIVIFA 331 Schizosaccharomyces...
Q8WZS3   252 qggQDIMSMMgqlmKPKMTEITDKLRSEINKVVSKYIDQGVAELVPGVLFIDEAHMLDVECFTYLNKALESPISPIVVLA 331 Neurospora crassa O...
6GEN_T   260 qggQDVISMMgqllKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLA 339 Saccharomyces cerev...
Q8IAT2   319 ---KDNILDFlqnnKSKKTEITDKLRNEINKIVYKYVDQGIAQIIPGVLFIDEVHMLDIECFTYLNRTLESNLAPVVILA 395 Plasmodium falcipar...
O28462   251 ---TSIFSLF----SPPSREIDNEVREAVDEQVKRLVEEGRAELVPGVLFIDETHLMDIELFAFMNRAMESEMAPIIILA 323 Archaeoglobus fulgidus
6GEN_U   325 TNRGVSKTRGT-NYKSPHGLPLDLLDRSIIITTKSYNEQ 362 Saccharomyces cerevisiae S288C
Q8IIU3   351 TNRGICTVKGT-DNIEPHGIPVDLLDRLIIIKTFPYTLK 388 Plasmodium falciparum 3D7
Q9GZH2   324 TNRLIEKVRGT-DVESAHGIPSDFLDRMLIINAIPYTKE 361 Caenorhabditis elegans
Q8SU27   302 TNKGECIVRGT-DEPSPYGIPRDFIDRALIISMEKHCRR 339 Encephalitozoon cuniculi GB-M1
OCA39313 331 TNRGNCIIRGTeDVASPHGIPLDLLDRVMIIRTMLYTPQ 369
Q9C0X6   332 SNRGICTIRGTeDIQAPHGIPTDLLDRLLIVRTLPYSES 370 Schizosaccharomyces pombe 972h-
Q8WZS3   332 SNRGMTGIRGAeDLVAAHGIPPDFLSRLLIIPTTAYDPE 370 Neurospora crassa OR74A
6GEN_T   340 SNRGMTTVRGTeDVISPHGVPPDLIDRLLIVRTLPYDKD 378 Saccharomyces cerevisiae S288C
Q8IAT2   396 TNRGICNIKGT-NIISAHGIPVDLLDRIIIVKTMLYNKE 433 Plasmodium falciparum 3D7
O28462   324 SNRGFSRIRGT-DIVAPHGIPLDLLDRLLIITTEPYSRE 361 Archaeoglobus fulgidus
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