Conserved Protein Domain Family
Viral_Rep
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pfam02407: Viral_Rep 
Putative viral replication protein
This is a family of viral ORFs from various plant and animal ssDNA circoviruses. Published evidence to support the annotated function "viral replication associated protein" has not be found.
Links
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Statistics
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PSSM-Id: 280553
Aligned: 4 rows
Threshold Bit Score: 125.758
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q87009   2 ARRYCFTLNYATEieretFLSLFSQDELNYFVVGDETAttGQKHLQGFVSFKNK-IRLGGLKKKFGN-RAHWEIARgSDS 79  Subterranean clover s...
Q87013   6 STSWVFTLNFEGE-----IPILPFNESVQYACWQHERV--GHDHLQGFIQFKSRnTTLRQAKYIFNGlNPHLEIAR-DVE 77  Subterranean clover s...
Q9ICP7   5 VICWCFTLNNP-------LAPLSLHESMKYLVYQTEAGdnGTIHYQGYVEMKKR-TSLVQMKKLLPG--AHLEKRRgSQG 74  Subterranean clover s...
Q86567   5 vVCWMFTINNPTT-------LPVMRDEIKYMVYQVERGqeGTRHVQGYVEMKRR-SSLKQMRGFFPG--AHLEKRKgSQE 74  Banana bunchy top vir...

Q87009  80 QNRDYCCKE 88  Subterranean clover stunt virus (strain F)
Q87013  78 KAQLYAMKE 86  Subterranean clover stunt virus (strain F)
Q9ICP7  75 EARAYAMKE 83  Subterranean clover stunt virus (strain F)
Q86567  75 EARSYCMKE 83  Banana bunchy top virus isolate Autralia
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