Conserved Protein Domain Family
McrA

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COG1403: McrA (this model, PSSM-Id:224321 is obsolete and has been replaced by 441013)
5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]
Statistics
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PSSM-Id: 224321
Aligned: 58 rows
Threshold Bit Score: 48.7928
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17233293  89 FAIRDALTSRRQLRRSRRSRKTRYRQPRffnrtrpqg---------wlapslqsrVENIKTWVNRLRKVAPITAISQELV 159 Nostoc sp. PCC 7120
16126111  16 WNPEERPSIPAEIKRRVLVEAGHRCAIPtc-------------------------rHIEVDIHHIVPWRTCQAHEYENLI 70  Caulobacter crescen...
15807469   1 ------MHYAPPMARRNSQSTWPEAPA----------------------------AEAPPTCALCGREVPELVQHHLVP- 45  Deinococcus radiodu...
15807800 733 VCLCCGKRTQLQVDHIQSRYAGGTHDLDnlqll-----------------cqvcnNLKGTREMNFRQHVSPLTSGAQVQV 795 Deinococcus radiodu...
17549822  85 IYKTASAPLTQDLGDYCSYCGTPLPGLLevehtvpkspyptfatdwtnfllccgpCNTAKSNTPSRATATPWTSKPSPTE 164 Ralstonia solanacearum
15601072  30 VSTFEIHHIQPFVDVKKHEERNLILLCSnc------------------------hSKATVGELTEIEVLRLKVGLISSSS 85  Vibrio cholerae
17229911   1 ---MASRKISDAIQQQIRQRASELCEY----------------------------CHASEKWQYVLFTVDHIIPLSQNG- 48  Nostoc sp. PCC 7120
17233091   1 ---MGSTSISTELRKLVISRASERCEY----------------------------CLIHQDFSIYTHEVDHIIAVKHGG- 48  Nostoc sp. PCC 7120
13471727   1 MIPFVWGICMPTLRNPQYRAFARRKLYR---------------------------RQDGKCFYCHRDLTTKKTGELALTI 53  Mesorhizobium loti
16330310   1 ---MSKSYISPSLRRLVSDRANHSCEY----------------------------CLIPEALSLSSHHVDHIIAEKHGG- 48  Synechocystis sp. P...
17233293 160 KFDTQLIRHPDIQGKEyqqgtlagfetrqyflekwnRECAYCGIK---------DvPLQIEHIHPKSK------------ 218 Nostoc sp. PCC 7120
16126111  71 ALCPNCHRRADREEIDr------------------kSLKLYKLNLrfv---hekYsQIEMDMLFDLARap---------- 119 Caulobacter crescen...
15807469  46 -II-AGKRKGLRPQDL--------------------PTVGLCPAC------------QQYLHSTFSIN------------ 79  Deinococcus radiodu...
15807800 796 NADLLFRRTAVRAEDN--------------------LFTLLCRNVn----------MGLECHAVADVRy----------- 834 Deinococcus radiodu...
17549822 165 QELYDAIRDDHYIWPDlnstswddlplyleyvdpvtGQWTVLSDPfdtdannklTgYDVVNHKVSADLqisstqllsnvq 244 Ralstonia solanacearum
15601072  86 GQSKETMPSNVITLDSvknhgv--------ianqvtLNNSPAKVVllp---avgSiASSLKHQNYIKYlidkyh------ 148 Vibrio cholerae
17229911  49 EDTIENLALACFHCNR--------------------RKSAKTTAL-----------DPESGLEVPLFN------------ 85  Nostoc sp. PCC 7120
17233091  49 ETVKDNLALSCLTCNR--------------------HKGSDFATI-----------DSTTGEIVPLYN------------ 85  Nostoc sp. PCC 7120
13471727  54 EHRKAKMKGGTDDLKNl------------------vAACWHCNHHr----------GEQMNATKQRKE------------ 93  Mesorhizobium loti
16330310  49 HSTPENLAFSFSLCNQ--------------------AKGSDIASI-----------DPHTGETVRLYN------------ 85  Synechocystis sp. P...
17233293 219 --------GGSNSI--TNLTLSCEKCNLKKGTQDIKNFLkkDKSRLEKILALTKKSLADAAAVNTT 274 Nostoc sp. PCC 7120
16126111 120 -------dGVGAPWtpFMLIFFKRVIDSGFVNVYELPGG--IFVNGIKSSPSYLTITELGRNFISE 176 Caulobacter crescentus CB15
15807469  80 --------ELATEL--NTLEALEQNEQVQKFVKWVRKQP--ATKGVKAKGRE-------------- 119 Deinococcus radiodurans
15807800 835 --------VAATKRrpAHCEIALYEGNDPAWVQPLLDRAftLWKRDNPNFAQTFADSAQIVGVRPL 892 Deinococcus radiodurans
17549822 245 vavtvsssNTHSLQarADAMIDLMQFNNDVTSPLTGTYDrrVMNRTRAWFYALEKCKLLETATTQA 310 Ralstonia solanacearum
15601072 149 --aykiveVGKSNMkyPVFYNALKRKFGAKWDMVPIDRFleLSTYIQDRIEKTVLGKKLKAQGKKS 212 Vibrio cholerae
17229911  86 --------PRQSLW--SEHFIWSADKLKINGLTPTGKAT--IAALNLNRERIVNIRAADKVVNRYP 139 Nostoc sp. PCC 7120
17233091  86 --------PRRQIW--EEHFYFEGVR--IEGKSQVGQAT--TRLLQFNLANRLLQRQVLMSQGKYP 137 Nostoc sp. PCC 7120
13471727  94 --------AKALSR---QRRMLARDCRSKADSQADGKAHeqLASKVEGNGANRTPSVHTARSEGLG 148 Mesorhizobium loti
16330310  86 --------PRKDIW--TNHFTLESISGLVQPKTAIGRVT--ANLLRINRVESLTVRQILAKIGEL- 138 Synechocystis sp. PCC 6803
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