Conserved Protein Domain Family
PRP8

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COG5178: PRP8 
U5 snRNP spliceosome subunit [RNA processing and modification]
Statistics
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PSSM-Id: 227505
Aligned: 3 rows
Threshold Bit Score: 3522.94
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
464441      1 MSGLPpppPGFeedsdlalPPPPPPPPGYEieeldnpmvpssvnedtflpppppPPSnfEinaeeivdftlPPPPPPPGL 80   baker's yeast
19074153    1 ------------------------------------------------------------------------MLPYDPRV 8    Encephalitozoon c...
19114773    1 MASLP---PGN--------PPPPPPPPGFE------------------------PPS--Q-----------PPPPPPPGY 32   fission yeast
464441     81 DeLETKAEKKVELHGKRKLDIGKDTFVTRKSRKRaKKMTKKAKRSNLYTPKAEMPPEHLRKIINTHSDMASKMYNTDKKA 160  baker's yeast
19074153    9 N-----SRIQLSIVQDILGHSGNPIYSLDVSDIP-VMLGNLARTLHVLSLQKPIPQQHLLRVQSPCSVKPQVLTKVDRR- 81   Encephalitozoon c...
19114773   33 --VKKRKNKTPAQSGNLEKQLNERARKWRASQK--SKFGVKRKQGYVQTEKADLPPEHLRKIMKDRGDMSSRKFRADKRS 108  fission yeast
464441    161 FLGALKYLPHAILKLLEN-MPHPWEQAKEVKVLYHTS-GAITFVNETPRVIEPVYTAQWSATWIAMRREKRDRTHFKRMR 238  baker's yeast
19074153   82 ---QISMFPVRVEDLLVNlLPSVWMDVSIHCCDVPCHrGLVCISIDVHCSGDNQLFCCCGLCSSPHAFLLRERYSFDSK- 157  Encephalitozoon c...
19114773  109 YLGALKYLPHAVLKLLEN-MPMPWEEYREVKVLYHVT-GAITFVNESPRVIEPHFIAQWGTMWMMMRREKRDRKNFKRLR 186  fission yeast
464441    239 FPPFDDDEPPLSYEQHIENIEPLDPINLPLDSQDDEYVKDWLYDSRPLeEDSKKVNGTSYKKWSFDLPEMSNLYRLSTPL 318  baker's yeast
19074153  158 -----SLECLLKKSIWVLGVCPVMPPNIRKERMPPEHLRRIVRTSRDM---HPSFMGAMR----YMPHALHNLLRSMPMP 225  Encephalitozoon c...
19114773  187 FPPFDDEEPPFSIDQLLD-LEPLEAIRMDLDEEDDAPVMDWFYENKAL-EDTPHVNGPTYRRWKLNLPQMANLHRLGYQL 264  fission yeast
464441    319 RDEVTDKNYYYLFDKKSFFNGKALNNAIPGGPKFEPLYPRE--EEEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPR 396  baker's yeast
19074153  226 WESIRYVDVVYHVSGLITFVAEKR---REDADEYKRRWSRVsaSFSSETQKRGLVRILRYPVFDDDDPVVDYGSIIGLPV 302  Encephalitozoon c...
19114773  265 LSDLRDDNYFYLFNDNSFFTAKALNVAIPGGPKFEPLYKDEapEMEDWNEFNDIYKLIIRHPIKTEYRIAFPYLYNSRAR 344  fission yeast
464441    397 SVRIPWYNNPVSCIIQNDEEYDTPALFFDPSLNPIP------HFIDNNSSLNVSNTKENGDFTLPeDFAPLLAEeEELIL 470  baker's yeast
19074153  303 PTAVECEGSEECRDVFLDEDERYLFNCKTFLISRHLgvqldnGPYVGKGANEEVCVMERKLGSER-IAYPYLYN-KSTEV 380  Encephalitozoon c...
19114773  345 SVALSEYHQPSNVFVP-PEDPDLPAFFWDPIINPITsrqltlHELD--TSPEDSAIEEDPNFEIP--FDPFFHS-EDIEF 418  fission yeast
464441    471 PNTKDAMSLYHSPFPFNRTKGKMVRAQDVALAKKWFLQHPDEEYPVKVKVSYQKLLKNYVLNELHPTLPTNHNKTKLLKS 550  baker's yeast
19074153  381 RTLERAHLNLKNSFGRKKGKGRAEKRKRHPADIPLLKGYCLQERADGGPR-VGNLLRNYARNMQKKTRKRPP--THILKE 457  Encephalitozoon c...
19114773  419 EHTASALILLWAPHPFNKRSGATKRAQDVPLIKHWYLEHCPPNQPVKVRVSYQKLLKSHVMNKLHMAHPKSHTNRSLLRQ 498  fission yeast
464441    551 LKNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIHRKGLTYLHLDYNFNLKPTKTLTTKERKKSRLGNSFHLMRELLKMMK 630  baker's yeast
19074153  458 LKNTRYFQRTEIDWVEAGLQLVYQGHRMLSEVLRRKKLSYLVLDWNFNLKPIRQLTTKERKKSRVGTSYHLTREMLKFIK 537  Encephalitozoon c...
19114773  499 LKNTKFFQSTSIDWVEAGLQVCRQGYNMLQLLIHRKGLTYLHLDYNCNLKPTKTLTTKERKKSRFGNAFHLMREILRLTK 578  fission yeast
464441    631 LIVDTHVQFRLGNVDAFQLADGIHYILNHIGQLTGIYRYKYKVMHQIRACKDLKHIIYYKFNKN-LGKGPGCGFWQPAWR 709  baker's yeast
19074153  538 HLVDIHVLFRQGHIDCYELMGNVGHVLNNVGVLTGIYRYKYKLMKQIKRCKSWKRLSDYARTEG----------WGEQWR 607  Encephalitozoon c...
19114773  579 LIVDSHVQYRLGNIDAYQLADGLHYIFNHVGQLTGMYRYKYRLMRQIRACKDFKHLIYYRFNTGpVGKGPGCGFWAPSWR 658  fission yeast
464441    710 VWLNFLRGTIPLLERYIGNLITRQFEGR-SNEIVKTTTKQRLDAYYDLELRNSVMDDILEMMPESIRQKKARTILQHLSE 788  baker's yeast
19074153  608 TWCFMFRGHIPLLGRYISGLVTRIAEGR--DYNPKPLSKQRSESGYDVALKRQIMAEASSILHP----TQVRRLLQHFGE 681  Encephalitozoon c...
19114773  659 VWLFFLRGIVPLLERWLGNLLARQFEGRhSTGVAKQITKQRVDSHQDLELRAAVMNDILDMIPEGIRQGKSKTILQHLSE 738  fission yeast
464441    789 AWRCWKANIPWDVPGMPAPIKKIIER--------------------------------------YIKSKADAWVSAAHYN 830  baker's yeast
19074153  682 AWRCWKANVPYHIVLEHIKALEVKRSgsvsleqrglrgtaetttvslealkamtdvarqssgnaFISSEQSLITFSDGFV 761  Encephalitozoon c...
19114773  739 AWRCWKANIPWKVPGLPAPIENMILR--------------------------------------YVKSKADWWTSVAHFN 780  fission yeast
464441    831 --RERIKRGAHVEKTMVKKNLGRLTRLWIKNEQERQRQIQK-NGPEITPEEATTIFSVMVEWLESRSFSPIP---FPPLT 904  baker's yeast
19074153  762 skMEEMSRIAGVGHLKELFELQRIIDKYVRLKSEWYVDSAVgVGKKSKKEEKKRLGKITRLYMKERMAEQVEylgLPFLR 841  Encephalitozoon c...
19114773  781 --RERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYLK-DGPYVTADEAVAIYTTFVHWLESRRFQPIP---FPPLS 854  fission yeast
464441    905 YKNDTKILVLALEDLKDVYASKVRLNA-----------------SEREELALIEEAYDNPHDTLNRIKKYLLTQRVFKPV 967  baker's yeast
19074153  842 PPEAVAIYRLSAEYFRSKGTGRIPFPEkneerflhiavdrlkksATAEESEFLDKALEESADTIFRIKKSLLTQRSFKEV 921  Encephalitozoon c...
19114773  855 YKHDTKLLVLALERLKEAYSVKGRLNQ-----------------SQREELALVEQAYDNPHEMLSQIKRRLLTMRTFKEV 917  fission yeast
464441    968 DITMMENYQNISPVYSVDPLEKITDAYLDQYLWYEADQRKLFPNWIKPSDSEIPPLLVYKWTQGINNLSEIWDVSRGQSA 1047 baker's yeast
19074153  922 GVTLKRHGDGAIECYHVSHVERLVDAFLCAYLFYESDRLNIFPEFIKPGD-EMNMRTLMDFCDKISSFKAAED----ERL 996  Encephalitozoon c...
19114773  918 GIEFMDMYSHLIPVYSVDPMEKICDAYLDQYLWFEADRRHLFPSWVKPSDSEPPPLLVYKWCQGINNLTDVWETSNGECN 997  fission yeast
464441   1048 VLLETTLGEMAEKIDFTLLNRLLRLIVDPNIADYITAKNNVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLG 1127 baker's yeast
19074153  997 VLYEGKYEGIMRMVDNNLLSKLLKLVLDPALADYIISRNNCKVVYKDMVYTNHVGFIKGLQLSSFVYKFYSFIVDLCVLG 1076 Encephalitozoon c...
19114773  998 VLMETRLSKVFEKVDLTLLNRLMSLLMDTNLASYASAKNNVVLSYKDMSHTNSYGLVRGLQFSSFIWQFYGLVLDLLILG 1077 fission yeast
464441   1128 QERATDLAGPANNPNEFMQFKSKEVEKAHPIRLYTRYLDRIYMLFHFEEDEGEELTDEYLAENPDPNFENSIGYNN-RK- 1205 baker's yeast
19074153 1077 -------------EDVFMDEKSR-------IKWYFRHMDDIYIVFRLQRKEEDSLLEDYGREAERMEEAMNERRRNyFDg 1136 Encephalitozoon c...
19114773 1078 LQRATEIAGPADAPNDFLHFKDQATETSHPIRLYTRYIDKVYIMFRFTDEESRDLIQRFLNENPDPTNSNVVNYSKgKKn 1157 fission yeast
464441   1206 CWPKDSRMRLIRQDVNLGR--AVFWEIQSRVPTSLTSIKWENAFVSVYSK---NNPNLLFSMCGFEVRILPRQRMEEVVS 1280 baker's yeast
19074153 1137 AWRDACDEESGPLFSNYGRreEGKGEILRRCIHAEVATRMLPSLGRIRFRgcsIFPFVKFSMVGVDVLISSK--KIHER- 1213 Encephalitozoon c...
19114773 1158 CWPRDARMRLMKHDVNLGR--AVFWEIRNRLPRSLTTLEWEDTFPSVYSK---DNPNLLFSMTGFEVRILPKIRQNEEFS 1232 fission yeast
464441   1281 NDEGVWDLVDERTKQRTAKAYLKVSEEEIKKFDSRIRGILMASGSTTFTKVAAKWNTSLISLFTYFREAIVATEPLLDIL 1360 baker's yeast
19074153 1214 -SS--WRLGNG------MHANLAVSEGGIEMFESNISHIVSTSGSATFLKVATRWNTQILAFVTYYRECICDTKGLVEKL 1284 Encephalitozoon c...
19114773 1233 LKDGVWNLTDNRTKQRTAQAFIRVTEDGINQFGNRIRQILMSSGSTTFTKIANKWNTALIALMTYYREAAISTPELLDLL 1312 fission yeast
464441   1361 VKGETRIQNRVKLGLNSKMPTRFPPAVFYTPKELGGLGMISASHILIPASDLSWSKQTDTGITHFRAGMTHEDEKLIPTI 1440 baker's yeast
19074153 1285 QRAERLIGNVVKKGINSKMPVRFPPVMFYAPKEMGGLGMLSVGGIRVSHEDFEGSEDVN--------------DRMIPAA 1350 Encephalitozoon c...
19114773 1313 VKCESKIQTRVKISLNSKMPSRFPPAVFYSPKELGGLGMLSMGHVLIPQSDLRWSKQTDTGITHFRSGMTTNGEHLIPNL 1392 fission yeast
464441   1441 FRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSWDRGIPRISTLFQRDRHTLAYDRGHRIRREFKQYSLE 1520 baker's yeast
19074153 1351 MDYVSRWDYEFEESNRVWKEYGR----SG-----------KMEPDKGIPRMSTLLQRSR-WLLYDRGFRMISMFRIYSGK 1414 Encephalitozoon c...
19114773 1393 YRYIQPWESEFIDSQRVWAEYAMKRQEALQQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKQYQLL 1472 fission yeast
464441   1521 RNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTGFNSWEGLFWEKASGFEDSMQFKKLTHAQRTGLSQ 1600 baker's yeast
19074153 1415 PD-WFWFTDAKHDGKLWSMERFTLDTLEALGGVGGIADHTLFGATYFRSFSKVFWEDMV----VEKYRKLTNAQKMGLSQ 1489 Encephalitozoon c...
19114773 1473 KNNPFWWTSQRHDGKLWQLNNYRVDVIQALGGVEGILEHTMFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLNQ 1552 fission yeast
464441   1601 IPNRRFTLWWSPTINRANVYVGFLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDICQILDGELDVLQIES 1680 baker's yeast
19074153 1490 IPNRRFILWWSPTINRGNVYVGYQVQLDQTGILMHGKLPTLKISFIQIFRNQLWRRIHESVVGGLCDVFRKYCDVKRLE- 1568 Encephalitozoon c...
19114773 1553 IPNRRFTLWWSPTINRANVYVGFQVQLDLTGIMMHGKIPTLKISLIQIFRSHLWQKIHESVVWDLCQVLDQELESLQIET 1632 fission yeast
464441   1681 VTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGLITNKMWFDVQLRYGDYDSHDISRYVRAKFLDYT 1760 baker's yeast
19074153 1569 -----VHGRKSYRLRSSCADILLSG--DFCVDSPISILEERDGGS-VRCSELWIDVQLRWGDYDKRNPHKYARTRFVECT 1640 Encephalitozoon c...
19114773 1633 VQKETIHPRKSYKMNSSCADILLLAAYKWNVSRPSLLNDNRDVLDNTTTNKYWIDVQLRFGDYDSHDIERYTRAKFLDYS 1712 fission yeast
464441   1761 TDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQSSVQEPFLNSSNY 1840 baker's yeast
19074153 1641 ADPQALYPVKNGFVVVLDLCYNTWSGYGNLNEELKTVLKSSMERIVVEDAMLHILRERLRKALQLYTS-----------D 1709 Encephalitozoon c...
19114773 1713 TDAQSMYPSPTGVLIGIDLCYNMHSAYGNWIPGMKPLIQQSMNKIMKANPALYVLRERIRKGLQLYASEPQEQYLSSSNY 1792 fission yeast
464441   1841 AELFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSAL 1920 baker's yeast
19074153 1710 IEVVSNSGDLFTSGLLVDVKALLR-KEK--T-------LFVLDPASGNLYFK---S--YSGESKKIRQTKVLAAQDVFQL 1774 Encephalitozoon c...
19114773 1793 AELFSNQIQLFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAAL 1872 fission yeast
464441   1921 VRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSAAMSIDKLSDVVMKATEPQMVLFNIYDDWLDRIS 2000 baker's yeast
19074153 1775 G-----EELNKRSIVVPESMIDAMENFIIDHPSISVRTCLSAPPFSNVMGIKEIR------AERSVRSINLYEGWG-ETS 1842 Encephalitozoon c...
19114773 1873 IRSLPVEEQPRQIIVTRKGMLDPLEVHLLDFPNITIKGSELQLPFQAIIKLDKINDLILRATEPQMVLFNLYDDWLQSVS 1952 fission yeast
464441   2001 SYTAFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLWPSFTDEQWITIESQMRDLILTEYGRKYNVNISALTQTEIK 2080 baker's yeast
19074153 1843 RFTNFCRLLLVVQGMDVDEARVRELG---------INALWPGFSDSEWIKKEIQLKDLIVDRYCSMHGIEPSGLSQSEVR 1913 Encephalitozoon c...
19114773 1953 SYTAFSRLILILRALNVNTEKTKLILRPDKSIITKENHVWPNLDDQQWLDVEPKLRDLILADYAKKNNINVASLTNSEVR 2032 fission yeast
464441   2081 DIILGQNIKAPSVKRQKMAELEaarseKQNDEEAAGASTVMKTKTINAQGEEIVVVASADYESQTFSSKNEWRKSAIANT 2160 baker's yeast
19074153 1914 DIVFGFRVSKGQGATVETIDTG-----IRNSKKMLSRPANVSFGCIDGWRRRYVKLDGMIRSGE----LEKWISEVRRTG 1984 Encephalitozoon c...
19114773 2033 DIILGMTITAPSLQRQQIAEIE-----KQGRENAQ--VTAVTTKTTNVHGDEMVVTTTSAYENEKFSSKTEWRNRAISSI 2105 fission yeast
464441   2161 LLYLRLKNIYVSADDFVEE-QNVYVLPKNLLKKFIEISDVKIQVAAFIYGMSAKDHPKVKEIKTVVLVPQLGHVGSVQI- 2238 baker's yeast
19074153 1985 PLEG------ETAEENEHSiQQMPRIPLNLIEGFMRLVDPHVLTFGLVIG--G-------DILSFGMVPQFSSLSGIHSs 2049 Encephalitozoon c...
19114773 2106 SLPLRTKNIYVNSDNISETfPYTYILPQNLLRKFVTISDLRTQVAGYMYGKSPSDNPQIKEIRCIALVPQLGSIRNVQLp 2185 fission yeast
464441   2239 SNIPdiGDL-PDT-EGLELLGWIHTQTEELKFMAASEVATHSKLFADK-KRD--CIDISIFSTPGSVSLSAYNLTDEGYQ 2313 baker's yeast
19074153 2050 LFVP------GGD-----IVGVVVNGDD----LEVAGTLCERYKIVDP--------------LAVLISDRIRVVKKSGCN 2100 Encephalitozoon c...
19114773 2186 SKLP--HDLqPSIlEDLEPLGWIHTQSSELPYLSSVDVTTHAKILSSHpEWDtkAVTLTVSYIPGSISLAAYTVSKEGIE 2263 fission yeast
464441   2314 WGEENKDIMNVLSEGFEPTFSTHAQLLLSDRITGNFIIPSGNVWNYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPVHFL 2393 baker's yeast
19074153 2101 WN------------EVHAVLGKD--L-------GVFYVP--EMWNYNFARPFYDDRLEYTWKIGMPHGFYDGFCRVGHFS 2157 Encephalitozoon c...
19114773 2264 WGSKNMDINSDEAIGYEPSMAEKCQLLLSDRIQGFFLVPEEGVWNYNFNGASFSPKMTYSLKLDVPLPFFALEHRPTHVI 2343 fission yeast
464441   2394 QFSELAGDEELEAEQIDVFS 2413 baker's yeast
19074153 2158 RFYQDRAGG--EEWQED--- 2172 Encephalitozoon cuniculi
19114773 2344 SYTELETNDRLEEDMPDAFA 2363 fission yeast
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