1ZNC


Conserved Protein Domain Family
alpha_CA_IV_XV_like

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cd03117: alpha_CA_IV_XV_like 
Click on image for an interactive view with Cn3D
Carbonic anhydrase alpha, CA_IV, CA_XV, like isozymes. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidine residues. This subgroup, restricted to animals, contains isozyme IV and similar proteins such as mouse CA XV. Isozymes IV is attached to membranes via a glycosylphosphatidylinositol (GPI) tail. In mammals, Isozyme IV plays crucial roles in kidney and lung function, amongst others. This subgroup also contains the dual domain CA from the giant clam, Tridacna gigas. T. gigas CA plays a role in the movement of inorganic carbon from the surrounding seawater to the symbiotic algae found in the clam's tissues. CA XV is expressed in several species but not in humans or chimps. Similar to isozyme CA IV, CA XV attaches to membranes via a GPI tail.
Statistics
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PSSM-Id: 239391
Aligned: 20 rows
Threshold Bit Score: 314.207
Created: 1-Nov-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitezinc binding
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:zinc binding histidines and other residues found to be important for enzymatic activity
  • Structure:1ZNC_A, Human Carbonic Anhydrase Iv bound with zinc and sulfate, contacts at 3.5 A.
  • Citation:PMID 8942978

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                           #                          
1ZNC_A      30 KDRQSPINIVt----tKAKVDk-----kLGRFFFSgydk----kqtwTVQNNGHSVMMLLEn----kASISGGGLp-aPY 91   human
AAX16122    43 GNRQSPISIPy----gHVTYDp-----sLTSFNLTgyddtmtssgplQLTNNGHTVVLNVNta--naTKMSGGGLd-gEY 110  Tridacna gigas
CAG08850    10 GLRQSPINIVt----sKVRMNd-----aLQPFTFIghts----rinvTVENKGHSAHFVLPq----lVRLTGGGLs-gQY 71   Tetraodon nigrov...
AAX16122   317 GKKQSPIDIPavtsvkVAQFDsnkgldtLEFINYDqti-------ngIIKNNGHTIQVDVNnd---nIYIHKGDLv-gRF 385  Tridacna gigas
XP_788807   26 GNSQSPININss---iATTTD-------LGSFVLDgytde---ntnmDLVNNGNKIVIQFHddvedlYKLSGGGLp-tTY 91   purple urchin
XP_696548   46 DSHHSPINLDh-----HLMKNh-----sLDSLQLHgfnlt--hkgqwWLTNQGHSVVLEVGd----gMQVSGGGLp-aTY 108  zebrafish
CAG07583    48 GTRQSPINIVs----aNAQANe-----nLVAFTFSnygst---talkSIQNTGHTVKVSLNs----gVKVSGGGLs-eSY 110  Tetraodon nigrov...
AAH67185    33 GTQQSPINIVt----aNVKANa-----nLTSFTYVgynds---taltVIKNTGTSIQVTLDpk---kMRVAGGNLp-gRF 96   zebrafish
XP_684426 1286 GHNQSPINIDt----qKTIKSq-----eLGPFDLInfnlp---htmkMLRNNGHTVECKLKag---vVGVQGGGLk-hKY 1349 zebrafish
AAK16671    48 GPTQSPINIDl----rLVQRDy-----tLKPFIFQgydsa--pqdpwVLENDGHTVLLRVNscqqncPAIRGAGLpspEY 116  house mouse
Feature 1         # # #            #            #                                              
1ZNC_A      92 QAKQLHLHWsdl---pykGSEHSLDGEHFAMEMHIVHEKekgtsrnv-keaqdpeDEIAVLAFLVEAgt----qVNEGFQ 163  human
AAX16122   111 YAAQLHYHWgad---dsvGSEHAIDNRYSPLEVHLVHYKasagsvs---aglqsgDGLAVLGFLFEIdey--dqNNTRLD 182  Tridacna gigas
CAG08850    72 RAAQFHFHWggr---grpGSEHTIDGERFPMEMHIVHIKepygsla---eaehdmAGIALLAFLFEEaa----eDHPRLD 141  Tetraodon nigrov...
AAX16122   386 KVAQFHFHWgrn---nneGSEHTHNGRKYPLELHIVHYNesygsla---kaagmfDGLAVVGFWFEIg-----aENTNYS 454  Tridacna gigas
XP_788807   92 TATHIHFHWgsm---nsgGSEHQIDSTPYPAELHVAHYDkskyadltaavtsmqwDAATILGAFIEVg-----eHNTAFD 163  purple urchin
XP_696548  109 RTFQLHFHWgsv---ssnGSEHTLDHLRFPMEMHIVNIKsthpnlt---saledpTGIAVLGVFVDVty----lHNENFQ 178  zebrafish
CAG07583   111 DSLQFHLHWgngs--svpGSEHTVDGKQYPMELHIVNLKssyngnt--tqgvadsEGLAALGFFIEVmdgdatgSPASWK 186  Tetraodon nigrov...
AAH67185    97 ASTEFHLHWgngs--ampGSEHTVNGKRFPMELHIVNKPvsn-----------tsDSLAVLGVFIEAsne--tgKPESWK 161  zebrafish
XP_684426 1350 TVLQFHFHWggrdprqqpGSEHSLNRHRWPVEMHIVSRRtdlnds----aasrvpDGFAVMGFFIDGke---nvTSQVWE 1422 zebrafish
AAK16671   117 RLLQLHFHWgsp---ghqGSEHSLDEKHGSMEMHMVHMNtkyqsme---darsqpDGFAILAVLLVEed----rDNTNFS 186  house mouse
Feature 1                                                              #                       
1ZNC_A     164 PLVEALsnip------kpeMSTTMAES-SLLDLLPKeek------lrHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQ 230  human
AAX16122   183 PLITSLtevl------yknGETNIAMN-FAHTMPEDws-------slEYYRYLGSLTTPTCDEAVVWTVFENRIPISTAQ 248  Tridacna gigas
CAG08850   142 TIITALgrv-------qnnGSSTVIPNfRLSDLVPSare------lhSYYRYVGSMTTPGCEQAVAWTVFHRTLPISSRQ 208  Tetraodon nigrov...
AAX16122   455 PIISSLpdvk------fkdANRGITGF-TLRDLSFPdlksssqgrayDFFRYDGGLTTPGCNEHVIWTMMTNTVKISNSQ 527  Tridacna gigas
XP_788807  164 PFLSHIsqianyssgvtslGQGNLPSF-PIRSVLPSdl--------sKFYRYNGSKAVPDCNEAIIWTIFTDTISISQAQ 234  purple urchin
XP_696548  179 SISSALsyva------ykgQTKSIKPF-PLVNLLPQnn-------ltQYYRYHGSLTTPPCSEVVLWTIYEVPVYISWAQ 244  zebrafish
CAG07583   187 TLTSYLnnit------nagDSANLTSGlTLDSLLEGvd-------rtKYYRYLGSLTTPSCNEAVVWTVFKEPIKVSKDL 253  Tetraodon nigrov...
AAH67185   162 TLTSYLtriv------kagDKANLFRNlSMDDLLSGvd-------rtKYYRYLGSLTTPNCNEGVIWTVFKDPIRVSRDL 228  zebrafish
XP_684426 1423 NFMEYLqkip------rkgDTVRITDDiSLQQLLTGvd-------lsRYYRYSGSLTTPPCDEAVQWTVFKDPIIISTDQ 1489 zebrafish
AAK16671   187 AIVSGLknls------spgVAVNLTSTfALASLLPSalr------llRYYRYSGSLTTPGCEPAVLWTVFENTVPIGHAQ 254  house mouse
Feature 1                                              
1ZNC_A     231 ILAFSQKlyydke-----qtvsmKDNVRPLQQLGQRTVIK 265  human
AAX16122   249 LAKFRELkqlvsta---pqnyplTYNYRPLQPLGNREVKK 285  Tridacna gigas
CAG08850   209 LDDIVQQcrfwt-------gqpmMDIFRPTQPLDGRVVYR 241  Tetraodon nigroviridis
AAX16122   528 LVAFREMlhvkdtgrtlvekdkiGLNYRPTQPLYNRVVHA 567  Tridacna gigas
XP_788807  235 LDIFRTVygehada---qgnyevVDNYRYLQPLNGRTVYY 271  purple urchin
XP_696548  245 FEQFVSGiysteee--aeiqallHDNYRHIHPTYSRPVYA 282  zebrafish
CAG07583   254 IDLFSTKvyfnts----ttsplmTNVFRSIQTSDLQVTTQ 289  Tetraodon nigroviridis
AAH67185   229 IDLFSTTvyinns----snsplmTNIFRSVQPVNGRIVMS 264  zebrafish
XP_684426 1490 LLRFQTVs--------------fGYVYRPQQSLNKRTGYA 1515 zebrafish
AAK16671   255 VVQFQAVlqtgppg---lhprplTSNFRPQQPLGGRRISA 291  house mouse

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