1Q99,1Q8Y,3BEG,2X7G,1WBP


Conserved Protein Domain Family
STKc_SRPK

?
cd14136: STKc_SRPK 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. They play important roles in mediating pre-mRNA processing and mRNA maturation, as well as other cellular functions such as chromatin reorganization, cell cycle and p53 regulation, and metabolic signaling. Vertebrates contain three distinct SRPKs, called SRPK1-3. The SRPK homolog in budding yeast, Sky1p, recognizes and phosphorylates its substrate Npl3p, which lacks a classic RS domain but contains a single RS dipeptide at the C-terminus of its RGG domain. Npl3p is a shuttling heterogeneous nuclear ribonucleoprotein (hnRNP) that exports a distinct class of mRNA from the nucleus to the cytoplasm. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
?
PSSM-Id: 271038
Aligned: 33 rows
Threshold Bit Score: 492.091
Created: 18-Jul-2006
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                          #####   #              # #                                    
1Q99_B         9 PAFKGEPYkdaRYILVRKLGWGHFSTVWLAKDMvn--nTHVAMKIVRGdkVYTEAAEDEIKLLQRVNDAdntke---dsm 83  baker's yeast
1Q8Y_A         9 PAFKGEPYkdaRYILVRKLGWGHFSTVWLAKDMvn--nTHVAMKIVRGdkVYTEAAEDEIKLLQRVNDAdntke---dsm 83  baker's yeast
AAX80285     156 PVVVGEVYn-qRYRVVRKLGWGYFSTVWLVWDYve--kVFQAMKVQKSakHYTEAAYDEIKLLGEIMTAdp--------e 224 Trypanosoma brucei
XP_968798    132 PIAEGDNLd-dKYEVCRKLGYGQFSTVWLCQNKln--dEFVAIKVSKSqsKLRALAQDEIKLLDCAILAnpd------ha 202 red flour beetle
NP_573080    192 PVAIGDVFv-nRYHVFKKLGWGHFSTVWLCYDTqm--dRYCAVKVSKSaqVYKETGIDEIMLFSQMSLHdqh-------k 261 fruit fly
AAZ29249      45 PVKVGEVYk-sNYRIVKKLGWGHFSTVWLAIDEkn-ggREVALKIVKSasHYREAAEDEIHLLQTISEGdp--------e 114 slime mold
XP_650579     56 PVVIGEEYn--GYIIQKKLGFGHFSTVWLVEHKen--kIQGALKIVKSakTYTETALDEIKIMKKINECdp--------e 123 Entamoeba histo...
XP_656125     33 KVEIGEVFn-kKYIVKTKLGWGHFSTVWLVEFQnngkfEQGALKVVRSaqKYTETARDEIEILKTISNNdp--------l 103 Entamoeba histo...
XP_001234249  20 PVREGEVFn-aRYQALRELGSGAFATVWLCQDMrk--kKNVAVKVLKSreGFAEAAQDELSLLRCVNNMkkk------dq 90  chicken
XP_002909010 123 RVLAGEVYn-sRFEVLEKLGWGHFSTVWKCLDRet--gALVAMKVQKSarHYTEAAKDEIELLECTVHAartqfesteqq 199 Phytophthora in...
Feature 1             #                   ####  #                                         # # ## 
1Q99_B        84 gANHILKLLDHFNHKGpnGVHVVMVFEVLGeNLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRrCGIIHTDIKPENV 163 baker's yeast
1Q8Y_A        84 gANHILKLLDHFNHKGpnGVHVVMVFEVLGeNLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRrCGIIHTDIKPENV 163 baker's yeast
AAX80285     225 kVRRCARLNDHFEQQGpnGKHVCMVFDVYGeDLLSLIERYKYHGVPLPIVKCISRQILIGLEHVHS-LDIIHTDLKPENV 303 Trypanosoma brucei
XP_968798    203 gYKNIVQMFDFFSCQSvnGNHTAIVLEVMGpSLLHLIKQSEYRGIQLPGVRRIIKQVLQGLQYLHEeCGIIHTDLKPENI 282 red flour beetle
NP_573080    262 yRSHVVGFYDFFEITGphGRHICLVLEVLGdNLLKVIERCFYKGMPISNIKQIAQQVLTGLKFLHEeCGIIHTDLKPENV 341 fruit fly
AAZ29249     115 sKYCVVKLLDSFLHTGphGKHICMVFEKLGsNLLDLIKLHNYKGIPLPLVKCMTKQILIGLDYLHTkCKIIHTDLKPENV 194 slime mold
XP_650579    124 rKENVIHILEDFKHNGpnGQHICMVMELGGsNLLDLIKYYDYKGIPINDCKEIAKQILKALDFIHTkCGIIHTDLKPENV 203 Entamoeba histo...
XP_656125    104 rECYCLHLIDSFQHRGlnGIHMCIVTEVGGsNLLSLIKLYHYHGIPLEITKEISRQVLVALNYLHTkCSLIHTDLKPENV 183 Entamoeba histo...
XP_001234249  91 aGENIICLLDDFRVIGenGFHMCLVFEALGpSLQFLLGNYAAQGLPLPFVKKSLQQVLAGLHFLHGrCRIIHADIKPENV 170 chicken
XP_002909010 200 eAIKVIRLVDSFEHKGpnGVHVCMVFEMMGdNLLTLIKYYNYRGVPMQLVQRLTRDIMEGLAFLHDkCQIIHTDLKPENV 279 Phytophthora in...
Feature 1        #                                                                               
1Q99_B       164 LMEIVdsp------------------------------------------------------------------------ 171 baker's yeast
1Q8Y_A       164 LMEIVdsp------------------------------------------------------------------------ 171 baker's yeast
AAX80285     304 LLSAPkhaivsqmkrfkppplhdrpslvkrdpktmtksqrrryykklraagkg--------------------------- 356 Trypanosoma brucei
XP_968798    283 LIKAKepyirqmvntakrfselgiippktyvtsnrwsdvqpyskdle--------------------------------- 329 red flour beetle
NP_573080    342 LLASNevsvrteiktaievylkanegklspsskmtktakrrmqakskkvisffknhrrmlrrqgiedllylaergliepi 421 fruit fly
AAZ29249     195 LLDHLlrpdtlnwddqfldgasssspisndaen----------------------------------------------- 227 slime mold
XP_650579    204 LLSFTipkngk--------------------------------------------------------------------- 214 Entamoeba histo...
XP_656125    184 LLNFVidhnhikr------------------------------------------------------------------- 196 Entamoeba histo...
XP_001234249 171 LLYIHdknlhrflldgaecgqgtdl------------------------------------------------------- 195 chicken
XP_002909010 280 LLSHQipqlpkirkaqweaframrqktqgggttsnnagssggakmskeekkrlknrlkkkrqkqrkqgaavdgeasvdes 359 Phytophthora in...
Feature 1                                                                                        
1Q99_B           --------------------------------------------------------------------------------     baker's yeast
1Q8Y_A           --------------------------------------------------------------------------------     baker's yeast
AAX80285         --------------------------------------------------------------------------------     Trypanosoma brucei
XP_968798        --------------------------------------------------------------------------------     red flour beetle
NP_573080    422 taamavsdnlpfipfgfdgfmmmsdadcrtv------------------------------------------------- 452 fruit fly
AAZ29249         --------------------------------------------------------------------------------     slime mold
XP_650579        --------------------------------------------------------------------------------     Entamoeba histo...
XP_656125        --------------------------------------------------------------------------------     Entamoeba histo...
XP_001234249     --------------------------------------------------------------------------------     chicken
XP_002909010 360 adngkmdstarptltsntvdtlsnnlsqlaisatikknepadgafvsnfaelsadidssdstrtwyyqvgqlgdeedkdw 439 Phytophthora in...
Feature 1                                                                                        
1Q99_B           --------------------------------------------------------------------------------     baker's yeast
1Q8Y_A           --------------------------------------------------------------------------------     baker's yeast
AAX80285         --------------------------------------------------------------------------------     Trypanosoma brucei
XP_968798        --------------------------------------------------------------------------------     red flour beetle
NP_573080        --------------------------------------------------------------------------------     fruit fly
AAZ29249         --------------------------------------------------------------------------------     slime mold
XP_650579        --------------------------------------------------------------------------------     Entamoeba histo...
XP_656125        --------------------------------------------------------------------------------     Entamoeba histo...
XP_001234249     --------------------------------------------------------------------------------     chicken
XP_002909010 440 ihlppefaarvmlllpegrvagskrkereftlsvstkpsvdseeevvdtsfalryvdhvdddvmssieakmleiredcss 519 Phytophthora in...
Feature 1                                                                                        
1Q99_B           --------------------------------------------------------------------------------     baker's yeast
1Q8Y_A           --------------------------------------------------------------------------------     baker's yeast
AAX80285         --------------------------------------------------------------------------------     Trypanosoma brucei
XP_968798        --------------------------------------------------------------------------------     red flour beetle
NP_573080    453 -------------------------qnsklpemegmeykcdrinlclkspelflryvldiiknldekelstqdkrrrftq 507 fruit fly
AAZ29249         --------------------------------------------------------------------------------     slime mold
XP_650579        --------------------------------------------------------------------------------     Entamoeba histo...
XP_656125        --------------------------------------------------------------------------------     Entamoeba histo...
XP_001234249     --------------------------------------------------------------------------------     chicken
XP_002909010 520 qnsgsatkvkyrlwrlefdarythavldylehrieglrflnlstssgialpgfflpkppsnediktaakktkkpehddvq 599 Phytophthora in...
Feature 1                                                                 #                      
1Q99_B       172 ------------------------------------------------enLIQIKIADLGNACWYDEHYTNSIQTREYRS 203 baker's yeast
1Q8Y_A       172 ------------------------------------------------enLIQIKIADLGNACWYDEHYTNSIQTREYRS 203 baker's yeast
AAX80285     357 --kdsaegneeqnddediarevhvdpneaapqqsekeplsetdseweverLHHVVLADFGNSCWTYRQFTDEVQTRQYRS 434 Trypanosoma brucei
XP_968798    330 --------eyeraqllrtrsypqdpflseivsfrrkhaepklkgpmwidaNIEVKIGDMGNATWVNNKYNSTIQTRQYRA 401 red flour beetle
NP_573080    508 asgrgqtkknarsrlrlasnaayttgtgwrsnrkinlndiypidpannecDVRVKIADLGNACYFHHHFTDDIQTKEYRA 587 fruit fly
AAZ29249     228 -----------------------arqtrsgkikwepsariadslsrkivkVPIVKIADLGTACWTHKHFTDDVQTRQYRC 284 slime mold
XP_650579    215 ---------------------------------------------epipkIIESKLADFGNANWINKRFTDDIQTLEYRS 249 Entamoeba histo...
XP_656125    197 ------------------------------------------rnqvppanNIKVMLADFGNANWIEKRFTNDIQTRQYRC 234 Entamoeba histo...
XP_001234249 196 -------------------------------rlkapggdpgnqledsdlmSMEVKIADLGSACWTYKPFSKEIQTQPYRA 244 chicken
XP_002909010 600 vdvviqgimllprmgsedkmslevkplqqrlgrwaarfnklaksevfnlmKLDAKICDLGNACWTSKHFTNDIQTRQYRC 679 Phytophthora in...
Feature 1                                                                                        
1Q99_B       204 PEVLLGaPWGCGADIWSTACLIFELITgDFLFEPDEgh-sYTKDDDHIAQIIELLGELPSYLLRNG-KYTRTFFnsrg-- 279 baker's yeast
1Q8Y_A       204 PEVLLGaPWGCGADIWSTACLIFELITgDFLFEPDEgh-sYTKDDDHIAQIIELLGELPSYLLRNG-KYTRTFFnsrg-- 279 baker's yeast
AAX80285     435 PEVILGyPYSTSIDLWSAACMIFELITgEFLFDPRKgs-dYSRDEDHLALISELLGVLPVSMRLGDgKYRAQYYnsrg-- 511 Trypanosoma brucei
XP_968798    402 LEVILDaGYDCPADVWSVGCLAFELATgEFLFYPKMyn-nFSLDVDHITLIWEVLGGIPTYITKRG-SKADTFFsngk-l 478 red flour beetle
NP_573080    588 LEVILGaGYCETADIWSVACLLWELATgTYLFDTHSkrgkYNLDEVHIAKIVETCGRIPWYLIRKG-KHSRNFInsag-- 664 fruit fly
AAZ29249     285 PEVILGqKWDTTIDMWSLACMVFELATgDLLFCPKKgd-kYDKTDDHLALMIELLGRMPRSFITKG-SKSEKYFnskg-- 360 slime mold
XP_650579    250 PEVILGlHWGCPVDIWSHGCMIFEMLTgDYLFKPKQgk-tFTLEEDHLAQFIELLGYFNKKYLNIA-PNTPKYFtrnyel 327 Entamoeba histo...
XP_656125    235 PEVMLGlHWGCPADVWSHACMIFELLTgDFLFAPKQtt-hYSKVEDHFAQFIELLGPIPRNMIDNS-PYKRKYFtndygl 312 Entamoeba histo...
XP_001234249 245 LEVLLGlDYGTPADIWSTACLAFEMATgECLFNPQPgk-yFSRDDDHVACIIELLGRIPPQIALSW-NKSTEFFrrpg-- 320 chicken
XP_002909010 680 PEVILGkRYDTSADIWSMACFVFELLTgDLLFNPKSgr-nFNRDEDHLAQMIELLGRMPKSYTGSQ-RGLREFFnrkg-- 755 Phytophthora in...
Feature 1                                                                   
1Q99_B       280 llrNISKLKFWPl-EDVLTEKYkfsKDEAKEISDFLSPMLQLDPRKRADaGGLVNHPWL 337 baker's yeast
1Q8Y_A       280 llrNISKLKFWPl-EDVLTEKYkfsKDEAKEISDFLSPMLQLDPRKRADaGGLVNHPWL 337 baker's yeast
AAX80285     512 elrSIKDLNFWGl-EDVLYRKHkftRKKAKEIAEFLLPMLELEPHNRATaTDMLNNFQH 569 Trypanosoma brucei
XP_968798    479 khiEESELKIWKi-EDVLVDKYkwkRLDAIPFAGFIEYLIEPDPSLRYTaSAALSCEWI 536 red flour beetle
NP_573080    665 klcNIETLKPLKl-ANILIRWYgwrTRQSTEFVNFLMPMLQTNPLSRISaSKALESHYL 722 fruit fly
AAZ29249     361 elkYIRKLGPQWgmSDVLYEKYrfpKEEADKLSAFLLPMLQYEPEKRATaRDSLEHPYM 419 slime mold
XP_650579    328 khiPNNELHLWKt-KEVLIEKYkflPEVAEPIASLIEGMLIYDENKRFTaKMCLEHPWF 385 Entamoeba histolytica HM-1:IMSS
XP_656125    313 kkiPNNQLSYWPl-DMVLRDKYkfsEHDSKQISSLLLPMLDYNELTRASaAQCLTHSWF 370 Entamoeba histolytica HM-1:IMSS
XP_001234249 321 allRISRLIPRSl-HTILADRLkwrKHEVPPFTSFLLSALRYAPEKRATaAQCLQHAWL 378 chicken
XP_002909010 756 dlkRIRSLKFWSl-QQVLVEKYhfsRQDAECLASFLGPMLRYDPAKRATaQDCLAHPWL 813 Phytophthora infestans T30-4

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap