1HTJ,3CX6,3CX7,3CX8


Conserved Protein Domain Family
RGS_PDZRhoGEF

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cd08753: RGS_PDZRhoGEF 
Click on image for an interactive view with Cn3D
Regulator of G protein signaling (RGS) domain found in the PDZ-Rho guanine nucleotide exchange factor (RhoGEF) protein
The RGS domain is an essential part of the PDZ-RhoGEF (PDZ:Postsynaptic density 95, Disk large, Zona occludens-1; RhoGEF: Rho guanine nucleotide exchange factor; alias PRG) protein, a member of RhoGEFs subfamily of the RGS protein family. The RhoGEFs are peripheral membrane proteins that regulate essential cellular processes, including cell shape, cell migration, and cell cycle progression, as well as gene transcription by linking signals from heterotrimeric G-alpha12/13 protein-coupled receptors to Rho GTPase activation, leading to various cellular responses, such as actin reorganization and gene expression. RhoGEFs subfamily includes leukemia-associated RhoGEF protein (LARG), p115RhoGEF, PDZ-RhoGEF and its rat specific splice variant GTRAP48. The RGS domain of RhoGEFs has very little sequence similarity with the canonical RGS domain of the RGS proteins and is often refered to as RH (RGS Homology) domain. In contrast to p115RhoGEF and LARG, PDZ-RhoGEF cannot serve as a GTPase-activating protein (GAP), due to the mutation of sites in the RGS domain region that are crucial for GAP activity. RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.
Statistics
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PSSM-Id: 188707
Aligned: 6 rows
Threshold Bit Score: 252.098
Created: 13-May-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
G-alpha-13
Conserved site includes 23 residues -Click on image for an interactive view with Cn3D
Feature 1:G-alpha-13 interaction site
Evidence:
  • Structure:3CX8_B: Human PRG-rgRGS binds G-alpha 13; contacts at 4 A
    View structure with Cn3D
  • Comment:Conserved IIG motif of PDZRhoGEF-RGS interacts with switch III region of G-alpha 13
  • Comment:Conserved EEDY motif interacts with GTPase active sites of G-alpha -13

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ####### ###                                ## ##                                
1HTJ_F         10 LIIGPEEDYDPGyfnnes-diifqdLEKLKSRPAHLGVFLRYIFS-QADPSPLLFYLCAEVYQqaspkdSRSLGKDIWNI 87   human
3CX6_B          2 LIIGPEEDYDPGyfnnes-diifqdLEKLKSHPAYLVVFLRYILS-QADPGPLLFYLCSEVYQqtnpkdSRSLGKDIWNI 79   Norway rat
3CX7_B          2 LIIGPEEDYDPGyfnnes-diifqdLEKLKSHPAYLVVFLRYILS-QADPGPLLFYLCSEVYQqtnpkdSRSLGKDIWNI 79   Norway rat
3CX8_B          2 LIIGPEEDYDPGyfnnes-diifqdLEKLKSHPAYLVVFLRYILS-QADPGPLLFYLCSEVYQqtnpkdSRSLGKDIWNI 79   Norway rat
NP_001027010  300 QIIGPEEEEEDDgytinemdgpfqdIELLKSRPAHMTVFMRYVFGqLLDPNPLLFYLSVEAYLgsspkdARSLAPQICSH 379  zebrafish
XP_423659     452 LIIGPEEDYDPGyfnnec-dslfqdLGKLKSRPAHLGVFLRYIFS-QADPSPLLFYLCADVCQqttakdSRGLGKDIWNI 529  chicken
Feature 1                                                               # #### ###  #
1HTJ_F         88 FLeknaplrvKIPEXLQAEIDSrlrnsedaRGVLCEAQEAAXPEIQEQIHDYRTKRTLGLGSLYGEN 154  human
3CX6_B         80 FLeknaplrvKIPEMLQAEIDLrlrnnedpRNVLCEAQEAVMLEIQEQINDYRSKRTLGLGSLYGEN 146  Norway rat
3CX7_B         80 FLeknaplrvKIPEMLQAEIDLrlrnnedpRNVLCEAQEAVMLEIQEQINDYRSKRTLGLGSLYGEN 146  Norway rat
3CX8_B         80 FLeknaplrvKIPEMLQAEIDLrlrnnedpRNVLCEAQEAVMLEIQEQINDYRSKRTLGLGSLYGEN 146  Norway rat
NP_001027010  380 FLdhdaplkiKVREEFLTDIENrlhaqediRGPLSELQQQVLPDIQDQLQDYRNKQTMGLGSLFGES 446  zebrafish
XP_423659     530 FLdrnaplrvKVSEQLLAEIEArlrngddvRSALFEAQEMVMPEIQEQIQDYRTKRTMGLGSLYGEN 596  chicken

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