1OJ7,1OJ7,1VLJ,4QGS


Conserved Protein Domain Family
BDH

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cd08187: BDH 
Click on image for an interactive view with Cn3D
Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process
The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.
Statistics
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PSSM-Id: 341466
Aligned: 304 rows
Threshold Bit Score: 290.489
Created: 29-Jul-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 24 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1OJ7; Escherichia coli NADP-dependent butanol dehydrogenase binds cofactor NADH and zinc, contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                          ###                            ##          
1OJ7_A     24 NFNLHTPTRILFGKGai-aGLREQIph-daRVLITYGGGSvkktGVLDQVLDALkg--mDVLEFGGIEPNPayeTLMNAV 99  Escherichia coli
EAY10078    2 KWLWTNTTQVGFGENvvqeHLKKFVqp-ksKVLVTFGGGSidknGARADVTKALaelecEVRWEGGIPPNPeydRLIEIA 80  Trichomonas vagina...
EAY07710    2 KWLWNNTTRVGFGQHcveeHFKDFVkp-nsRVLVTFGGGSidknGARADVTKALaelhcETIWEGGIPPNPeydRLIEIV 80  Trichomonas vagina...
EAX94240    2 KFLWRNTTQVAFGKEavkeYIPKFVkp-ksRIICTYGGGSifknGAHDDVQSALealgcEVKWEGGIPANPefdRCVEIV 80  Trichomonas vagina...
EAY10501    2 KWLWTNTTKVGFGSNvvqeHLKDFVtk-ksRILCTFGGGSieknGARSDVEKALselecEVKWEGGIQPNPryvKCLEII 80  Trichomonas vagina...
EEA81596    2 EFTYYNPVKLFHGATki-gEVAEEVksfgdKVLLITGGESfhknGYFDKLKTELeeknvQIYEISGNRKPLl-sTVRKGM 79  Tyzzerella nexilis...
EFR43416    3 DFQFYTPVKVYFGQDsh-eKLAAICkn--kKVMLVYGQKAikenGVYEEITRILnendiSYTDFGGNKLPLy-kKILEAV 78  Dialister microaer...
KPL81101    3 NFSFYNPTRIVFGKGsi-aNLPTQLat-dqSILMLYGGGSikknFIYNDVKAALag--yRVIEFGGVPSNPeyeVCMQAA 78  Levilinea sp. P3M-1
OHS99825    6 SYHWQNSTHIAFGVGai-sQLKKYIpr-eaRVLCLYNGDHieksGVKSDLEKVLtdceaRYRWRGGIENNPdfsSCLEIS 83  Tritrichomonas foetus
KXA69402    3 EFMYYNPVKLFCGEHql-sNVIKEIqqyghRVLLILGGESfiknGNYQPLVDALeaahiEREELRGNRVPSl-nVVRKGI 80  Megasphaera sp. MJ...
Feature 1                    ###  #                                       ##  # #  # # #      
1OJ7_A    100 KLvreqkvTFLLAVGGGSVLDGTKFIAAAANypeniDPWHILQtggk-eikSAIPMGCVLTLPATGSESNAGAVISRktt 178 Escherichia coli
EAY10078   81 QVvrewkpDLLLAVGGGSTLDGTKFLSLAAAldpsnEPWDIITkht--lpeTCTPIGSVMTLPATGSEWNSSFVISRrst 158 Trichomonas vagina...
EAY07710   81 KVakafkpDLLLAVGGGSILDGTKFISLAMNldesiDPWDIPTkgv--rpeKTTPVGAIITIPATGSEWNNGSVVSRrst 158 Trichomonas vagina...
EAX94240   81 KVvkefkpDLIIAVGGGSIVDGTKFISVASVipddaDPWDMVInak--fpdHHIPFATVMTLPATGSEWNNGWVISRrsl 158 Trichomonas vagina...
EAY10501   81 KIvreykpDLILAVGGGSVIDATKFIAAAACldefvVPWDIISkga--yakTAVPFGTVLTIPATGSEWNNGYAIQRddi 158 Trichomonas vagina...
EEA81596   80 ELvkaeniSSILGIGGGVCMDLAKTIAFGVKqt--tDIWDILSyaksldtmEHLPVGTIVTFPSSGSDMNGSTQITNdet 157 Tyzzerella nexilis...
EFR43416   79 EIckkekiNCIIGIGGCTCMDMAKIISFVCMn---eDHEDYIFakkdpvgkKHLETILIPTYASGGSEIDAVSEVDDl-- 153 Dialister microaer...
KPL81101   79 DVvlrekiGFILAVGGGSVIDAAKFIAAVARnp-qvEAWDIVSkka--plrGALPIGVVLTLAATGSEMNNISVISRkst 155 Levilinea sp. P3M-1
OHS99825   84 EElrktpaDILVAVGGGSVMDATKYISGIVNlpnsiDPWSVMSkps--ligRPIPIMSVCTLAATGSEWDPHFVISRrst 161 Tritrichomonas foetus
KXA69402   81 ALcrekniDCVLGIGGGCCMDIAKTIAFGVKqs--rDIWDYVTyqaepdtqEHLPVGMIPTFPSSGSDMNGSAQITNdet 158 Megasphaera sp. MJ...
Feature 1       #                   #  ##          #   #                                      
1OJ7_A    179 gDKQAFHSah-vqPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVtkpvdakIHDRFAEGILLTLIEDGPKalkep- 256 Escherichia coli
EAY10078  159 nDKLEYDSql-tfPKFSLLDPKYTMTLPTRQLRNGIFDAMCHCIDQFLtpq-vvpMMDNFWLSVMRELVDISLDllkpd- 235 Trichomonas vagina...
EAY07710  159 hEKLGMLIl---yPSFSLLDPLYTMTLPIRQLRNGLFDAMTHCMDQVLtph-vlpMQDNFFFSVMRELVDISGPilskdn 234 Trichomonas vagina...
EAX94240  159 nAKVSGSRcqityPEFSILDPKYTMTLSVRQLRNGLFDSFCHMVEQYCtge-pcpMFDSFWLSSIKEVFDIADAimspn- 236 Trichomonas vagina...
EAY10501  159 qEKNNSGSql-vyPQFSLIDPRYTMTLPARQLRNGLFDAMMHCTDQVItse-sapMSDNFYYSIMRELVDISDGlmkpn- 235 Trichomonas vagina...
EEA81596  158 gENVGLAEv---yPNFSWQNPEYMLSIENEALISAQMTAYVQLALGYIglg-ksdIAENTSLALMNTLLDNLDKaiads- 232 Tyzzerella nexilis...
EFR43416  154 -EKHRHGSlygiyADYAILNPEFTYSVSKKLTVNGALVSFIQMAISYIkne--npVGKVIGRALMKMLLQDIDNianrl- 229 Dialister microaer...
KPL81101  156 qEKYAFSSda-lyPQFSILDPQTTYTLPVEQIRNGLVDAFIHAGEQYMtfpnrnpLVDRQAEAIFSTLIEIAQDalrtp- 233 Levilinea sp. P3M-1
OHS99825  162 gEKISQAHnc-lrFKVSVLDPRYTLSVPFHYTANGVYDTFTHVCEQYItgf-fnpLQDRLSEAILSTIVEVAPKlmkdl- 238 Tritrichomonas foetus
KXA69402  159 tEQAGLSGv---yPNFTWLNPAYITKLPVASLIEGQLTAFVQVSIAYLgle-rsgIAEAMALTLMNSIRANLYKlvkep- 233 Megasphaera sp. MJ...
Feature 1                                      #             #                                
1OJ7_A    257 enydVRANVMWAATQALNGLIGAGvp--qdWATHMLGHELTaMHGLDHAQTLAIVLPALWNEkrdt---kraKLLQYaer 331 Escherichia coli
EAY10078  236 ssleLHGRLVVAATFALNLVFTLGkn--tcWGIHQIGHQLTaEYGIDHGATLAMVTIPFLRHfkke---refNLARSaer 310 Trichomonas vagina...
EAY07710  235 stleMHERLIVACSFALNYVLALGke--vcWGIHGIGHMLTaKWGIDHASTLAIISPFLLEEfine---reyNLARAaer 309 Trichomonas vagina...
EAX94240  237 qtieAHERLMMCALFGLNRLFGMVkg--qcWAIHTMGHQLTgVYGIDHGATLSIIMPHMYRElfeqrkyhlaELARFifn 314 Trichomonas vagina...
EAY10501  236 ssleLHERLITAASFAQNHIFTYAkr--pnWECHLVAQPLTpMYGIDHAATLSIVAPVLYEKvkkg---riqTMARAaer 310 Trichomonas vagina...
EEA81596  233 ndvdARSTLMTISALTVNGLTTLGka--gdWVLYPLNTIVMdYCNVAYKPCITVIFPYWIKMiyd----gqeEINSYfnk 306 Tyzzerella nexilis...
EFR43416  230 tnyeLRAEFMWLSSMSTVGFLSAGmggsyaWSIYSFETIAEaLYGIDYRTSMVIFFPAWLKVavkk---fpeEIKAFvve 306 Dialister microaer...
KPL81101  234 adydARAAYMWCATQALNGHLRCGap--qdWATHRIGHELTaLYGLAHAESLAPIWISLLRYkled---kmeKLAQYgrr 308 Levilinea sp. P3M-1
OHS99825  239 snlnFRATMMQCSALALNDLIGLGtg--qcWGTHNIGLALTaKYNMDHAETLACIQPWLWRRffdv---kkfKLAQMaer 313 Tritrichomonas foetus
KXA69402  234 dnqsVRTDLMVASALNVSGLTGLGks--gdWSLYPLEGIMQnYYGVGYKQAITVLFPYWLKQcyd----gqpVFKDYftq 307 Megasphaera sp. MJ...
Feature 1                                                                                     
1OJ7_A    332 vwnit--egsdderiDAAIAATRNFFEQLGVPt-hLSDYGLdg-----ssIPALLKKLEEHgmtqlge-----nhditlD 398 Escherichia coli
EAY10078  311 vfdir--egsdeekaTKFIERLQEWIISIGHVk-tVSECDHaklpikegdLEKLIKMVMVAngngpfg----yhksiteA 383 Trichomonas vagina...
EAY07710  310 vfdvh--egsdaekaKAFIAKLREWTVKIGQFtkvTDQEGAvva---pedVDAVTEMVMKSeggnpfg----yrktitrE 380 Trichomonas vagina...
EAX94240  315 akg------tddecaKIALKEIDNFIEKIGIAk-kVSDVCEan-----ksVDDLMTQLENFthgnpfg----fqgqvssE 378 Trichomonas vagina...
EAY10501  311 vfdvr--sgtdeekaDKFVESLRNWAVKLGMPl-kVSDCEYatki-npgdVQILTQKVKDLthsfpyr----fndelteT 382 Trichomonas vagina...
EEA81596  307 afdvviegrekkdilKDGLKAIFKLYRKYNLPi-nYSEIHE---------VKENSEALQESlemlagmq--siytelttE 374 Tyzzerella nexilis...
EFR43416  307 ifdidg-rflpekavEKACKKWYKLLDEAQLPt-sYDQIGKrp------eEKDLKFEIKRYlekp-----------fteE 367 Dialister microaer...
KPL81101  309 lwnlk--mpdpralaGQAIDRTEAFFNSIGMPt-hLREFGVdae----aaAREIEHRFTERnvvwge------nqditpE 375 Levilinea sp. P3M-1
OHS99825  314 vwgrk--sgsvdelaNYSILKTEEFTSMLKLSr-rIGGYVKek------dQEVAAKNIADKvwemvgrrpfgehkmikkE 384 Tritrichomonas foetus
KXA69402  308 vfgvdgsgksdeailAEGLQALFSFYRSFGFPt-sFAEIKErk-----esLNELRAAIALVgaqpsi------yttftvE 375 Megasphaera sp. MJ...
Feature 1            
1OJ7_A    399 VSRRIYE 405 Escherichia coli
EAY10078  384 DVTAILK 390 Trichomonas vaginalis G3
EAY07710  381 HVHHILE 387 Trichomonas vaginalis G3
EAX94240  379 MARRIYT 385 Trichomonas vaginalis G3
EAY10501  383 VVEEIFN 389 Trichomonas vaginalis G3
EEA81596  375 KVMQMIN 381 Tyzzerella nexilis DSM 1787
EFR43416  368 EVYEMMK 374 Dialister microaerophilus UPII 345-E
KPL81101  376 VSAEIVR 382 Levilinea sp. P3M-1
OHS99825  385 DVEVIVS 391 Tritrichomonas foetus
KXA69402  376 KIEQMML 382 Megasphaera sp. MJR9396C

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