6EPK


Conserved Protein Domain Family
Flavi_propep

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pfam01570: Flavi_propep 
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Flavivirus polyprotein propeptide
The flaviviruses are small enveloped animal viruses containing a single positive strand genomic RNA. The genome encodes one large ORF a polyprotein which undergos proteolytic processing into mature viral peptide chains. This family consists of a propeptide region of approximately 90 amino acid length.
Statistics
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PSSM-Id: 366710
Aligned: 3 rows
Threshold Bit Score: 65.9838
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6EPK_B    5 RKNRWLLLnVTSEDLGKTF----SVGTGNCTTNILEAKYWCPDSMEYNCPNLSpREEPDDIDCWCYGVEnVRVAYGKCDS 80  
P03314  126 RKNRWLLLnVTSEDLGKTF----SVGTGNCTTNILEAKYWCPDSMEYNCPNLSpREEPDDIDCWCYGVEnVRVAYGKCDS 201  Yellow fever virus 17D
P17763  120 RGGEPHMI-VSKQERGKSLlfktSAGVNMCTLIAMDLGELCEDTMTYKCPRIT-ETEPDDVDCWCNATE-TWVTYGTCSQ 196  Dengue virus 1 Naur...
6EPK_B   81 AG 82  
P03314  202 AG 203  Yellow fever virus 17D
P17763  197 TG 198  Dengue virus 1 Nauru/West Pac/1974
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