Conserved Protein Domain Family
IS200_TnpB

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NF038281: IS200_TnpB 
IS200/IS605 family element RNA-guided endonuclease TnpB
Statistics
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PSSM-Id: 468448
Aligned: 82 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_094246663   4 NKAYKFRIYPTKEQLVLINKTIGCSRFVYNFFLGKqnekdayWNICEEMKQNSqlpsnewkgsfLNKYATIKEIPALKke 83  Peribacillus si...
WP_088248482  10 NKAFVVRLYPNAAQAERINRTLGCARFVYNHFLAR-------RIETYRQDGKG-----------MTYAATDKALTLLKre 71  Deinococcus ind...
WP_015198555   2 QKAFKIALIPSHNQEVLINKTIGCARFVYNRFLAL-------RKELYATEQKT-----------LNYNTCSQELTLLKke 63  Calothrix sp. P...
WP_038261200   2 LKAYKYRLYPNREQQEFFAKCFGCARFIYNKMLSD-------RIDHYK-ETG---------------KSLKN-TPAQYka 57  Peptoclostridiu...
WP_074904944   2 LRAYKYRIYPNQDQQQYLAKVFGSVRFIYNRMLAD-------KIEHYK-QTE---------------TMLKN-TPAPYkk 57  Paenibacillus a...
WP_089522213   2 LRAYKYRIYPTVEQAHFFARTFGCVRFIYNKMLAD-------KISHYE-STG---------------KALKN-TPAQYkn 57  Paenibacillus h...
WP_136712624   2 LRAYKYRIYPDETQKVQLAKTFGCARFVYNYYLDK-------KIKGYENGEKS-----------ISKIDCNNHLNRELkk 63  Tissierella cre...
WP_059068142   2 LKAYKYRVYPNNEQKMQIAKTFGCCRFVYNQTLAY-------RKEAYEKEKKT-----------ISKTGCNNYCNRELkk 63  Mediterraneibac...
WP_105460079   2 LKACKYRMYPTKQQEEMFSKHFGCVRVIYNWALEQ-------KIKSYEQDGKA-----------ISRFT-LNKTIPKLye 62  Methanohalophil...
WP_127351016   2 IITYRYRLYPTKEQERQLKKTFGCVRFAWNYFLAY-------QKEVYRQQKKS-----------PNAFAWIRHLQQHLkr 63  Caldicellulosir...
WP_094246663  84 Y--SFLKEVDSIALQKSVENLADSYSRYYKKQNK--------SPRFKSKKNPVQSYTTKHTNGN------------IGII 141 Peribacillus si...
WP_088248482  72 EgtAWLAEVDKFALQQSLRDLERAYQNFFRTTKKsgk--kvgFPKFK-KKRTGEAYRTQFTNNN------------IELG 136 Deinococcus ind...
WP_015198555  64 I--EWLKEVDKFALQNSLKNLEAAYKNFFTDLKKskkkkgvgFPKFKKKYGCKQSYKTNLTNGN------------IQII 129 Calothrix sp. P...
WP_038261200  58 -dfPWLKEVDSLALANAQVNLNKAYNNFFRdkt-------vgFPKFKSRKFNYFSYTTNnqk-----------gtvHIE- 117 Peptoclostridiu...
WP_074904944  58 -efDWLKEVDSLALANAQMNLEKAYKHFFRdkk-------vgFPKFKSKKTNHHSFTTNnqn-----------gtvTIE- 117 Paenibacillus a...
WP_089522213  58 -efEWLKDVDSLALANAQLNLEKAYKNFFRdkk-------vgFPSFKSKKTNHHRYTTNnqk-----------gtvAIE- 117 Paenibacillus h...
WP_136712624  64 -elIWLKEVDKFALTNAIYNLDEAYQNFFRRVKTgkd--kagFPKFKSRHSNRFSYKSNstn-----------nniEVDY 129 Tissierella cre...
WP_059068142  64 -tyEWLKEVDKFALTNAIYNMDSAYQKFFkeh--------tgYPKFKSKHDNHKSYTTNftn-----------gniAVDL 123 Mediterraneibac...
WP_105460079  63 -dmEWLKEVNSQSLRGATLNLENAFTKFFRek--------igFPKFKSKKNPVQSFSVPqh--------------yKVDF 119 Methanohalophil...
WP_127351016  64 -eyPWLKEVDKFALENEIKSLEQAFERFFRnq--------akYPKFKRKKSNYFSYTTNFTNNNiqvdfgklatdtELNR 134 Caldicellulosir...
WP_094246663 142 GN-RIKLPKLG-LVRFAKSREVEGRIINATIRRNPSGKYFISVLAET-NVPVLP----STNRSCGVDLGLKNFAILSDGT 214 Peribacillus si...
WP_088248482 137 EG-HIKLPKLG-WVKTKGQRDMQGKILNVTVRRVHEGHYEASVLCEV-EIPYLPa---APKFAAGVDVGIKDFAIVTDGK 210 Deinococcus ind...
WP_015198555 130 EN-RLKLPKLG-WIKFYKSQDITGKLVNVTVTRTSSGKYIASILCET-EIEKYP----IGTQNIGLDLGIKSYLVTSEGE 202 Calothrix sp. P...
WP_038261200 118 -NgYIKLPKLKsPVRVKQHRQFTGTIKSCTISKTPAGRYFVSVLVETeIKQLQ-----PISSKVGIDVGLKEFAVLSD-G 190 Peptoclostridiu...
WP_074904944 118 -DgTIKIPKLKtRIKIKLHRPFVGLIKSCTISKTPTGNYYASVLVETeIVQLP-----KLETKIGVDLGLKDFAITSH-G 190 Paenibacillus a...
WP_089522213 118 -EgRLKLPKLKtNIRIKQHRPFTGVIKSCTVSKTPTGKYHASILVRTdLAELP-----KIDRKIGVDLGLKDFAITSM-G 190 Paenibacillus h...
WP_136712624 130 AKnKIKLPKLK-WCDAKVHREFDGEIKSATISQNPSERYFVSILVDEkIKELP-----KTNKEIGFDLGLSQFLIENN-G 202 Tissierella cre...
WP_059068142 124 ENgKIKLPKLK-EVKAKLHREFHGKIKSATVSQVPSGKCYVSILVETeHEKLP-----HRNQNIGLDLGIKDLCITSD-G 196 Mediterraneibac...
WP_105460079 120 DNnKVKLPKIG-WVKTKLHRHFDGKCKTATVSKIPSGKYFISILVDd-GKELPDkqdfDENSAVGIDVGIKDFAIMSN-G 196 Methanohalophil...
WP_127351016 135 CWgRIKLPKLG-WVKARIHRTFNGKIKTATVKLLPSGKYYVSITVEQdKVDNPKiketPANFATALDLGVKDFFVDSN-S 212 Caldicellulosir...
WP_094246663 215 -VYQNP---KFFRTVEKKLAKAQRILSRRQEialnqnkplaEAKNYQKQKRKVALLHEKISNSRMDYLHKVSTEIIKNHD 290 Peribacillus si...
WP_088248482 211 -EFTHHanpRYYRPTLSRLRKAQKTLSRRKK----------GSARYGKAKTKLARIHKRVANKRQDFLHKLTTSLVREYE 279 Deinococcus ind...
WP_015198555 203 -VIENP---KYYRLQLKKLRKANKKLSRSTK----------GSSNRVKAKIKLARIYERITNLRDDFLHKLSTRLIKENS 268 Calothrix sp. P...
WP_038261200 191 sRFANP---KHLRKSEKRLAKLQKDLSRKRK----------GSNNRNKARLKVAKLHEKISNQRSEFLHKLSTKIIRENQ 257 Peptoclostridiu...
WP_074904944 191 eTIANP---KYLRKSEKRLAKLQKDLSRKKK----------GSHNRHKARLKVAKLHEKISHQRKDFLHKTSAKMINDNQ 257 Paenibacillus a...
WP_089522213 191 eIISNP---NHMRKSENRLAKLQKDLSRKKK----------GSQNRDKARLKVATLHEKISNQRKDFLHKTSSRMINENQ 257 Paenibacillus h...
WP_136712624 203 nKIPNP---KHLSKNERKLAKLQRQLAKKQK----------SSKNRNKMRIKVARLHEKITDTRKDFLHKLSSQIINENQ 269 Tissierella cre...
WP_059068142 197 iRYENP---KIIKKNERKLSRLQRQLAHKEK----------GSRNYEKKKKEIAICHEKITNSRKDYLHKISHEIVSENQ 263 Mediterraneibac...
WP_105460079 197 eKIDNP---KYLNNSIKRLKVLQKRLSRKQR----------GSKNRGKAKQQIAKLHEKIANQRNDFQHKLSSRLISENQ 263 Methanohalophil...
WP_127351016 213 rHVENP---KILAKYERRIKKVQRELSRKRP----------GSKNFERTRRKLAKLYEKVTNIRMDFLHKWSSRVICENQ 279 Caldicellulosir...
WP_094246663 291 VIGMEDLQVSNMMKDHKLAKAISEVSWYQFKTMLEYKAKWYGKQIVTVSKTFASSQLCSGCGYQNKDVKHLNLREWDCPS 370 Peribacillus si...
WP_088248482 280 IIGTEHLKPDDMRKNRRLSLSISDAGWGEFMRQLEYKATWYGRLVSKISPYFPSSQMCHDCGFKNAEVKNLAVREWTCPN 359 Deinococcus ind...
WP_015198555 269 IICIEDLRVVNMVKNHKLALSISDASWSKFVTMLEYKALWHDRVVQKVGTFYPSSQTCNCCGLINPLVKDLKLREWSCPS 348 Calothrix sp. P...
WP_038261200 258 AIVIEDLKVKNMLKNHKLSKAISEVSWSMFRTMLEYKAEWYGRDIIIAPSNYASSQLCSSCGNKSSQTKDLSCRVYICPE 337 Peptoclostridiu...
WP_074904944 258 VIVMEDLRVKNMMQNHKLAKAISEVSWSMFRTMLEYKSAWYGRELMIAPKNYASSQLCSCCGHKNAEVKNLALREWTCSN 337 Paenibacillus a...
WP_089522213 258 VIVMEDLRVKNMVQNRNLAKAISEVSWSLFRSMLEYKANWYGRTVLIAPKHYASSQLCHVCEYRNAETKNLAIRQWLCPG 337 Paenibacillus h...
WP_136712624 270 VIVSEDINISGIIKNQRLAKAISDASWSEFTRQLEYKAAWYGRTYIKIDRFYPSSQICSNCGFKNIELKNLKIRDWTCES 349 Tissierella cre...
WP_059068142 264 VIVSENLQIKNMVKNHHLAKSISDVSWYELTRQLEYKSKWNGREYVKIDTFYASSQLCFACGYQNTDTKDLSVREWICPN 343 Mediterraneibac...
WP_105460079 264 AIALETLNVNGMLKNHCLAQSISDVSWSSFVTKLEYKAEWYGKSILRIGQFEPSTKICNVCGYHNKDIT-LADRKWQCPD 342 Methanohalophil...
WP_127351016 280 AIICEDLKVKNLVRNHHLAKSIMDVSWSKFVEMLEYKSKWYNRIFLKIPSSFPSSQICSSCGYRNEELKDLKIRTWQCPC 359 Caldicellulosir...
WP_094246663 371 CSSHHDRDINAGLNLMNEAI 390 Peribacillus simplex
WP_088248482 360 CGEIHDRDENAALNIRREAL 379 Deinococcus indicus
WP_015198555 349 CNSYNLRDKNASLNILSEGL 368 Calothrix sp. PCC 6303
WP_038261200 338 CGLEIDRDYNASLNLLKLAL 357 Peptoclostridium litorale
WP_074904944 338 CHSHHDRDVNAALNLLKLAM 357 Paenibacillus algorifonticola
WP_089522213 338 CGTEHDRDINAAKNLLKLAM 357 Paenibacillus herberti
WP_136712624 350 CGSHHDRDINASQNILKEGK 369 Tissierella creatinini
WP_059068142 344 CGTKQDRDINAAKNILAEGL 363 Mediterraneibacter massiliensis
WP_105460079 343 CGETHDRDVNAAINIKKFAL 362 Methanohalophilus euhalobius
WP_127351016 360 CRQKHDRDENAAKNILKQGL 379 Caldicellulosiruptor changbaiensis
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