2KI2


Conserved Protein Domain Family
RRM_HP0827_like

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cd12399: RRM_HP0827_like 
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RNA recognition motif (RRM) found in Helicobacter pylori HP0827 protein and similar proteins
This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827.
Statistics
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PSSM-Id: 409833
Aligned: 4 rows
Threshold Bit Score: 128.406
Created: 1-Mar-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2KI2_A     4 IYVGNLVYSaTSEQVKELFsqFGKVFNVKLIYDRETKKPKGFGFVEMQe-ESVSEAIAKLDNTDFMGRTIRVTEA 77  Helicobacter pylori
PRP81720  33 LYVGNLPWNvSENELKSAIneFVPVQAVKIPLDRETGRPRGFAFVDLGseEEAEKVIAEFHGKSFGGRILRVNEK 107 Planoprotostelium fungiv...
EJK75167  21 LYIGNLDYStDEPQLRSVFgaFGAVTDVFLPMERGTSRPRGFGFVTLStrQAAEDAIAKMDQSQLDGRTIRVNES 95  Thalassiosira oceanica
OSX72295 317 LFVGNLPFNaSTEELAEHFgsCGAVADVYCPMDRETERPRGFGFVSYEepEGASKAVAELDGVDFMGRALRINFA 391 laver
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