2IZR,2C47,2CMW


Conserved Protein Domain Family
STKc_CK1_gamma

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cd14126: STKc_CK1_gamma 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1 gamma
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK1 phosphorylates a variety of substrates including enzymes, transcription and splice factors, cytoskeletal proteins, viral oncogenes, receptors, and membrane-associated proteins. There are mutliple isoforms of CK1 and in mammals, seven isoforms (alpha, beta, gamma1-3, delta, and epsilon) have been characterized. These isoforms differ mainly in the length and structure of their C-terminal non-catalytic region. CK1gamma proteins are unique within the CK1 subfamily in that they are palmitoylated at the C-termini and are anchored to the plasma membrane. CK1gamma is involved in transducing the signaling of LDL-receptor-related protein 6 (LRP6) through direct phosphorylation following Wnt stimulation, resulting in the recruitment of the scaffold protein Axin. In Xenopus embryos, CK1gamma is required during anterio-posterior patterning. In higher vertebrates, three CK1gamma (gamma1-3) isoforms exist. In mammalian cells, CK1gamma2 has been implicated in regulating the synthesis of sphingomyelin, a phospholipid that is found in the outer leaflet of the plasma membrane, by hyperphosphorylating and inactivating the ceramide transfer protein CERT. CK1gamma2 also phosphorylates the transcription factor Smad-3 resulting in its ubiquitination and degradation. It inhibits Smad-3 mediated responses of Transforming Growth Factor-beta (TGF-beta) including cell growth arrest. The CK1 gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 271028
Aligned: 18 rows
Threshold Bit Score: 584.774
Created: 16-Dec-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:2IZR_A; Human CK1gamma3 binds inhibitor BRK; contacts at 4A.
  • Structure:2C47_D; Human CK1gamma2 binds inhibitor 5ID; contacts at 4A.
  • Structure:2CMW_A; Human CK1gamma1 binds inhibitor OLP; contacts at 4A.
  • Comment:also based on the structure of Schizosaccharomyces pombe CK1 with bound MgATP
  • Citation:PMID 7889932

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ####### #             # #                                              ##
2IZR_A        10 NFRVGKKIGCGNFGELRLGKNLy-tNEYVAIKLEPMKSRAPQLHLEYRFYKQLGs---GDGIPQVYYFGPCGkYNAMVLE 85  human
NP_788683     61 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAIKMEPMKSKAPQLHLEYRFYKLLGs--hAEGVPEVYYFGPCGkYNALVME 137 fruit fly
NP_492694     27 NFKVGKKIGCGNFGELRLGKNLy-nNEHVAIKLEPMKSKAPQLHLEYRFYKLLGq---AEGLPQVHYFGPCGkYNALVME 102 nematode
XP_002609883   5 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAIKLEPMKSRAPQLHLEYRFYKALGq--aGYGIPQVHYFGPCGkYNAMVLE 81  Florida lancelet
XP_001626389  45 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAIKLEPMKSRAPQLHLEYRFYKALGn---AEGIPQVHYFGPCGkYNALVME 120 starlet sea ane...
XP_002127729  51 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAIKLEPMKSRAPQLHLEYRYYKLLGn---TDGIPQVYYFGPCGkYNAMVME 126 Ciona intestinalis
XP_002403115  47 NFKVGKKIGCGNFGELRLGESSadgRRVMIVSLEPMKSKAPQLHLEYRFYKLLGn---NEGIPKVYYFGPCGkYNALVME 123 black-legged tick
ELT87193      46 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAIKLEPMKSRAPQLHLEYRFYKQLGq---SEGVPQVYYFGPCGkYNALVLE 121 Capitella sp. I...
EKC26376      39 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAVKCEPMKSRAPQLHLEYRFYKQLGq---SEGIPNVYYFGPSAkNNALVME 114 Pacific oyster
EFX89320      22 NFRVGKKIGCGNFGELRLGKNLy-nNEHVAIKLEPLKSKAPQLHLEYRFYRMMGrrstTTGLPEVYYFGPCGkYSALVME 100 common water flea
Feature 1        ###                                           # ## #               #            
2IZR_A        86 LLGPSLEDLFDLCdrTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRpgnktQQVIHIIDFALAKEYIDPET 165 human
NP_788683    138 LLGPSLEDLFDICgrRFTLKSVLLIAIQLLHRIEYVHSRHLIYRDVKPENFLIGRtstkrEKIIHIIDFGLAKEYIDLDT 217 fruit fly
NP_492694    103 LLGHSLEDLFDLCdrHFSLKTVAMVAMQLIRRIEYVHTKHLIYRDVKPENFLIGRystrkQHVLHIIDFGLAKEYIDCDT 182 nematode
XP_002609883  82 LLGPSLEDLFDLCdrQFSLKTVLIIAIQLITRIEYVHSKHLIYRDVKPENFLIGRqstknQNIIHIIDFGLAKEYIDPET 161 Florida lancelet
XP_001626389 121 LLGPSLEDLFDLCnrQFSLKTVLMVALQLISRIEYVHSKNMIYRDIKPENFLIGRksagkEKTINIIDFGLAKEYIDPET 200 starlet sea ane...
XP_002127729 127 LLGPSLEDLFDLCdrTFSLKTVLMVAIQLIHRIEYVHSKHLIYRDVKPENFLIGRigtpnQSTINIIDYGLAKEYIDPET 206 Ciona intestinalis
XP_002403115 124 LMGPSLEDLFDLCerKFSLKTVLLTAIQLLHRIEYVHAKHLIYRDVKPENFLIGRqstkkHSVIHIIDFGLAKEYIDPET 203 black-legged tick
ELT87193     122 LLGPSLEDLFDLCdrKFSLKTVLMVAIQLITRMEYVHSKHLIYRDVKPENFLIGRqsnkkQHCIHIIDFGLAKEYIDPET 201 Capitella sp. I...
EKC26376     115 LLGPSLEDLFDICdrKFTLKTVLMVAIQLISRMEFVHSKHLIYRDVKPENFLIGRqstnkQHIIHIIDFGLAKEYIDSET 194 Pacific oyster
EFX89320     101 LMGPSLEDLFDLCgrRFSLKNVLMIALQLIDRIEMVHRHDLIYRDVKPENFLIGRshnkkDKVIHIIDFGLAKEYIDAVT 180 common water flea
Feature 1                                                                                        
2IZR_A       166 KKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRATpiEVLC 245 human
NP_788683    218 NRHIPYREHKSLTGTARYMSINTHMgREQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRATpiEVLC 297 fruit fly
NP_492694    183 GKHIAYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRQTavEVLC 262 nematode
XP_002609883 162 HKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGEVKRATpiEVLC 241 Florida lancelet
XP_001626389 201 KKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRATpiEVLC 280 starlet sea ane...
XP_002127729 207 RKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRTTpiEVLC 286 Ciona intestinalis
XP_002403115 204 NKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRATpiEVLC 283 black-legged tick
ELT87193     202 HKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRATpiEVLC 281 Capitella sp. I...
EKC26376     195 HKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGDTKRATpiEVLC 274 Pacific oyster
EFX89320     181 NKHIPYREHKSLTGTARYMSINTHLgKEQSRRDDLEALGHMFMYFLRgSLPWQGLKADtlKERYQKIGETKRATpiEALC 260 common water flea
Feature 1                                                            
2IZR_A       246 ENf-PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYmfDYEYDWIGK 296 human
NP_788683    298 DGhpEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYtdEGEFDWTGK 349 fruit fly
NP_492694    263 EGfpDEFAQYLRYARRLDFFETPDYDFCYNLFKSVLDRLGAtyDYEFDWTPK 314 nematode
XP_002609883 242 EGypEEMATYLRYVRRLDFFETPDYDYLRKLFQDLMDRKGWknDGEFDWTGR 293 Florida lancelet
XP_001626389 281 ENhpEEMATYLRYVRRLDFFETPDYEYLRKLFRDLMERKGYveDFEFDWTHK 332 starlet sea anemone
XP_002127729 287 ENhpEEMATYLRYVRHLDFFETPDYDYLRKLFSDLYDRKGYphDDEFDWSGK 338 Ciona intestinalis
XP_002403115 284 DGy-PEMATYLRYVRRLDFFETPDYDYLRKMFHDLFERKGYvdDGEFDWTGK 334 black-legged tick
ELT87193     282 ENfpEELATYLRYVRRLDFFETPDYDYLRKLFTDLMTRSGWecDWEFDWTGR 333 Capitella sp. I Grassle & Grassle, 1976
EKC26376     275 ENfpEEFAQYLRYVRRLDFFETPDYDYLRRLFTDLMYQKGYecDWDFDWVGR 326 Pacific oyster
EFX89320     261 EGypEEFATYLRYVRRLDFFERPDYNYLRKLFRDLFDRMGYidDNEFDWTGK 312 common water flea

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