B3GNT5[gene] - ClinVar

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Items: 59

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 145614	GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3	LOC115995524, LOC115995525 +2647 more	Copy number gain	See cases	GPathogenic
Select item 57983	GRCh38/hg38 3q24-29(chr3:147521892-198096565)x3	LOC123453201, LOC123453202 +1450 more	Copy number gain	See cases	GPathogenic
Select item 150609	GRCh38/hg38 3q25.1-29(chr3:152100512-198118383)x3	LOC129938169, LOC129938170 +1318 more	Copy number gain	See cases	GPathogenic
Select item 154213	GRCh38/hg38 3q25.31-29(chr3:156118441-198125115)x3	LOC108281160, LOC108281177 +1247 more	Copy number gain	See cases	GPathogenic
Select item 152257	GRCh38/hg38 3q25.31-29(chr3:156321878-198113452)x3	ABCC5, ABCC5-AS1 +1245 more	Copy number gain	See cases	GPathogenic
Select item 57984	GRCh38/hg38 3q25.31-29(chr3:157293378-198134727)x3	LOC132088897, LOC132088898 +1201 more	Copy number gain	See cases	GPathogenic
Select item 155627	GRCh38/hg38 3q26.1-29(chr3:166137209-198125115)x3	LOC129938260, LOC129938261 +1064 more	Copy number gain	See cases	GPathogenic
Select item 153893	GRCh38/hg38 3q26.1-28(chr3:167717962-188365272)x3	ABCC5, ABCC5-AS1 +627 more	Copy number gain	See cases	GLikely pathogenic
Select item 148012	GRCh38/hg38 3q26.2-29(chr3:168167568-198110178)x3	LOC129938077, LOC129938078 +1041 more	Copy number gain	See cases	GPathogenic
Select item 149685	GRCh38/hg38 3q26.32-29(chr3:176168525-198118383)x3	ZMAT3, ZNF639 +867 more	Copy number gain	See cases	GPathogenic
Select item 148947	GRCh38/hg38 3q26.32-29(chr3:176439911-198118383)x3	LOC129938282, LOC129938283 +866 more	Copy number gain	See cases	GPathogenic
Select item 224832	NC_000003.12:g.177772523_185716872dup	ALG3, AP2M1 +280 more	Duplication	Currarino triad	GLikely pathogenic
Select item 153734	GRCh38/hg38 3q26.33-28(chr3:181138664-192512023)x1	ABCC5, ABCC5-AS1 +399 more	Copy number loss	See cases	GPathogenic
Select item 153971	GRCh38/hg38 3q26.33-27.3(chr3:182319764-186443121)x1	ABCC5, ABCC5-AS1 +205 more	Copy number loss	See cases	GLikely pathogenic
Select item 149403	GRCh38/hg38 3q26.33-27.1(chr3:182865842-183895718)x3	ATP11B, B3GNT5 +55 more	Copy number gain	See cases	GUncertain significance
Select item 3238952	GRCh38/hg38 3q27.1-27.2(chr3:183020090-185760128)x1	LOC121048724, LOC121048725 +160 more	Copy number loss	Esodeviation +7 more	GPathogenic
Select item 3132588	NM_032047.5(B3GNT5):c.13G>C (p.Val5Leu)	B3GNT5, MCF2L2 (V5L)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2234076	NM_032047.5(B3GNT5):c.23G>C (p.Arg8Thr)	B3GNT5, MCF2L2 (R8T)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2380873	NM_032047.5(B3GNT5):c.37T>C (p.Trp13Arg)	B3GNT5, MCF2L2 (W13R)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3132587	NM_032047.5(B3GNT5):c.106G>A (p.Asp36Asn)	B3GNT5, MCF2L2 (D36N)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2623962	NM_032047.5(B3GNT5):c.293C>T (p.Pro98Leu)	B3GNT5, MCF2L2 (P98L)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2395728	NM_032047.5(B3GNT5):c.316G>A (p.Gly106Arg)	B3GNT5, MCF2L2 (G106R)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2306359	NM_032047.5(B3GNT5):c.385T>A (p.Phe129Ile)	B3GNT5, MCF2L2 (F129I)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2604413	NM_032047.5(B3GNT5):c.407C>T (p.Pro136Leu)	B3GNT5, MCF2L2 (P136L)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2478720	NM_032047.5(B3GNT5):c.428A>G (p.Gln143Arg)	B3GNT5, MCF2L2 (Q143R)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3132589	NM_032047.5(B3GNT5):c.466A>G (p.Ile156Val)	B3GNT5, MCF2L2 (I156V)	Single nucleotide variant (missense variant +1 more)	not specified	GLikely benign
Select item 2460921	NM_032047.5(B3GNT5):c.554A>G (p.His185Arg)	B3GNT5, MCF2L2 (H185R)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3132590	NM_032047.5(B3GNT5):c.665G>A (p.Arg222His)	B3GNT5, MCF2L2 (R222H)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2623963	NM_032047.5(B3GNT5):c.722A>G (p.Tyr241Cys)	B3GNT5, MCF2L2 (Y241C)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2363879	NM_032047.5(B3GNT5):c.784G>A (p.Gly262Ser)	B3GNT5, MCF2L2 (G262S)	Single nucleotide variant (missense variant +1 more)	not specified	GLikely benign
Select item 2621209	NM_032047.5(B3GNT5):c.805T>G (p.Tyr269Asp)	B3GNT5, MCF2L2 (Y269D)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2330414	NM_032047.5(B3GNT5):c.808G>A (p.Glu270Lys)	B3GNT5, MCF2L2 (E270K)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3132591	NM_032047.5(B3GNT5):c.820A>G (p.Thr274Ala)	B3GNT5, MCF2L2 (T274A)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2386549	NM_032047.5(B3GNT5):c.853T>C (p.Phe285Leu)	B3GNT5, MCF2L2 (F285L)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2591851	NM_032047.5(B3GNT5):c.883A>G (p.Ile295Val)	B3GNT5, MCF2L2 (I295V)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 2366756	NM_032047.5(B3GNT5):c.890C>T (p.Pro297Leu)	B3GNT5, MCF2L2 (P297L)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3132592	NM_032047.5(B3GNT5):c.947A>G (p.Tyr316Cys)	B3GNT5, MCF2L2 (Y316C)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3132593	NM_032047.5(B3GNT5):c.981A>T (p.Glu327Asp)	B3GNT5, MCF2L2 (E327D)	Single nucleotide variant (missense variant +1 more)	not specified	GUncertain significance
Select item 3148910	GRCh37/hg19 3q26.33-29(chr3:179313373-197851444)x3	ABCC5, ABCF3 +136 more	Copy number gain	See cases	GPathogenic
Select item 3062712	GRCh37/hg19 3q26.33-27.2(chr3:179391972-185539073)x1	ABCC5, ABCF3 +47 more	Copy number loss	not specified	GPathogenic
Select item 2671619	Single allele	ABCC5, ABCF3 +145 more	Duplication	not provided	GPathogenic
Select item 2671595	Single allele	MUC20, MUC4 +286 more	Duplication	not provided	GPathogenic
Select item 2425419	NC_000003.11:g.(?_182733226)_(184094097_?)del	CAMK2N2, CLCN2 +26 more	Deletion	ALG3-congenital disorder of glycosylation +1 more	GConflicting classifications of pathogenicity
Select item 1710512	GRCh37/hg19 3q26.33-27.2(chr3:181062175-185474509)x1	DCUN1D1, ALG3 +41 more	Copy number loss	not provided	GPathogenic
Select item 1707630	GRCh37/hg19 3q26.31-29(chr3:171558472-197871052)x3	CCDC50, MELTF +155 more	Copy number gain	Isolated anorectal malformation	GLikely pathogenic
Select item 1527061	GRCh37/hg19 3q26.33-27.3(chr3:182189525-187212935)	ABCC5, ABCF3 +59 more	Copy number loss	not specified	GPathogenic
Select item 1328104	GRCh37/hg19 3q26.31-27.3(chr3:175119199-187592480)x3	ABCC5, ABCF3 +82 more	Copy number gain	not provided	GPathogenic
Select item 986761	GRCh37/hg19 3q26.33-27.1(chr3:180834336-183551661)x1	ATP11B, SOX2 +11 more	Copy number loss	Anophthalmia/microphthalmia-esophageal atresia syndrome	GPathogenic
Select item 986758	GRCh37/hg19 3q27.1(chr3:182871341-182987855)x1	B3GNT5, LAMP3 +1 more	Copy number loss	Anophthalmia/microphthalmia-esophageal atresia syndrome	GPathogenic
Select item 986756	GRCh37/hg19 3q26.33-27.2(chr3:181171210-184706091)x1	ECE2, FAM131A +34 more	Copy number loss	Anophthalmia/microphthalmia-esophageal atresia syndrome	GPathogenic
Select item 980554	GRCh37/hg19 3q27.1-27.3(chr3:182877291-186830759)x1	CLCN2, YEATS2 +52 more	Copy number loss	not provided	GPathogenic
Select item 814497	GRCh37/hg19 3q26.2-28(chr3:169617690-190593854)x3	FXR1, HTR3D +113 more	Copy number gain	not provided	GPathogenic
Select item 562848	GRCh37/hg19 3q26.33-28(chr3:182650681-191275809)x1	KNG1, FETUB +75 more	Copy number loss	not provided	GPathogenic
Select item 562847	GRCh37/hg19 3q26.33-29(chr3:182539234-197851986)x3	PPP1R2, TBCCD1 +126 more	Copy number gain	not provided	GPathogenic
Select item 442401	GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3	HHLA2, HIGD1A +1054 more	Copy number gain	See cases	GPathogenic
Select item 442400	GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)	A4GNT, AADAC +1054 more	Copy number gain	See cases	GPathogenic
Select item 393885	GRCh37/hg19 3q25.32-29(chr3:158980631-197766890)x3	ABCC5, ABCF3 +198 more	Copy number gain	See cases	GPathogenic
Select item 253377	GRCh37/hg19 3q24-29(chr3:142995020-192997215)x4	AADAC, AADACL2 +220 more	Copy number gain	See cases	GPathogenic
Select item 221801	GRCh37/hg19 3q27.1(chr3:182896411-183198268)x3	B3GNT5, MCF2L2	Copy number gain	Premature ovarian failure	GUncertain significance

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Items: 59