SYCP2[gene] - ClinVar - NCBI

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	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 146596	GRCh38/hg38 20p13-q13.33(chr20:99557-64277321)x3	JPH2, KAT14 +2522 more	Copy number gain	See cases	GPathogenic
Select item 59218	GRCh38/hg38 20q13.12-13.33(chr20:44787704-64277321)x3	ABHD16B, ACOT8 +1024 more	Copy number gain	See cases	GPathogenic
Select item 3235944	GRCh38/hg38 20q13.13-13.33(chr20:50805746-64334135)	ABHD16B, ADNP +635 more	Copy number gain	20q13.13qter duplication	GPathogenic
Select item 155517	GRCh38/hg38 20q13.2-13.33(chr20:53236165-64284202)x3	LOC130066385, LOC130066386 +553 more	Copy number gain	See cases	GLikely pathogenic
Select item 146317	GRCh38/hg38 20q13.2-13.33(chr20:55630597-60941207)x3	LOC121627913, LOC121853014 +175 more	Copy number gain	See cases	GLikely pathogenic
Select item 148973	GRCh38/hg38 20q13.2-13.33(chr20:56198032-64277321)x3	LOC130066289, LOC130066290 +491 more	Copy number gain	See cases	GPathogenic
Select item 152840	GRCh38/hg38 20q13.31-13.33(chr20:57229415-64273089)x3	LOC130066383, LOC130066384 +464 more	Copy number gain	See cases	GPathogenic
Select item 146530	GRCh38/hg38 20q13.32-13.33(chr20:59041966-64277321)x3	LOC130066362, LOC130066363 +355 more	Copy number gain	See cases	GPathogenic
Select item 3323842	NM_014258.4(SYCP2):c.4574A>T (p.Glu1525Val)	SYCP2 (E1525V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2278894	NM_014258.4(SYCP2):c.4568C>T (p.Ser1523Phe)	SYCP2 (S1523F)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2379581	NM_014258.4(SYCP2):c.4564A>G (p.Met1522Val)	SYCP2 (M1522V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172580	NM_014258.4(SYCP2):c.4462T>C (p.Cys1488Arg)	SYCP2 (C1488R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2373965	NM_014258.4(SYCP2):c.4441A>G (p.Thr1481Ala)	SYCP2 (T1481A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172579	NM_014258.4(SYCP2):c.4405G>A (p.Ala1469Thr)	SYCP2 (A1469T)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2498889	NM_014258.4(SYCP2):c.4368C>T (p.Ser1456=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 3172578	NM_014258.4(SYCP2):c.4249A>T (p.Ile1417Phe)	SYCP2 (I1417F)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2652458	NM_014258.4(SYCP2):c.4248C>T (p.Phe1416=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2376907	NM_014258.4(SYCP2):c.4206A>C (p.Gln1402His)	SYCP2 (Q1402H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 777601	NM_014258.4(SYCP2):c.4158G>A (p.Thr1386=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GBenign
Select item 2361925	NM_014258.4(SYCP2):c.4048C>A (p.Gln1350Lys)	SYCP2 (Q1350K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 721877	NM_014258.4(SYCP2):c.4023C>T (p.Asp1341=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GBenign
Select item 3323848	NM_014258.4(SYCP2):c.4010T>C (p.Leu1337Ser)	SYCP2 (L1337S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172577	NM_014258.4(SYCP2):c.4003T>C (p.Ser1335Pro)	SYCP2 (S1335P)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2598338	NM_014258.4(SYCP2):c.3970G>C (p.Asp1324His)	SYCP2 (D1324H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2279461	NM_014258.4(SYCP2):c.3863T>G (p.Ile1288Arg)	SYCP2 (I1288R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2514215	NM_014258.4(SYCP2):c.3854G>A (p.Arg1285His)	SYCP2 (R1285H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323843	NM_014258.4(SYCP2):c.3842A>T (p.Gln1281Leu)	SYCP2 (Q1281L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323846	NM_014258.4(SYCP2):c.3777T>G (p.Ser1259Arg)	SYCP2 (S1259R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2353485	NM_014258.4(SYCP2):c.3644A>G (p.Asn1215Ser)	SYCP2 (N1215S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172576	NM_014258.4(SYCP2):c.3635A>G (p.Gln1212Arg)	SYCP2 (Q1212R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172575	NM_014258.4(SYCP2):c.3611C>A (p.Ser1204Tyr)	SYCP2 (S1204Y)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172574	NM_014258.4(SYCP2):c.3598A>G (p.Lys1200Glu)	SYCP2 (K1200E)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2385694	NM_014258.4(SYCP2):c.3596G>A (p.Arg1199Lys)	SYCP2 (R1199K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172573	NM_014258.4(SYCP2):c.3556C>T (p.Pro1186Ser)	SYCP2 (P1186S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2368841	NM_014258.4(SYCP2):c.3491A>G (p.Asn1164Ser)	SYCP2 (N1164S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2299047	NM_014258.4(SYCP2):c.3460G>A (p.Gly1154Arg)	SYCP2 (G1154R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2498890	NM_014258.4(SYCP2):c.3456C>T (p.Asn1152=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2348276	NM_014258.4(SYCP2):c.3407C>G (p.Ser1136Cys)	SYCP2 (S1136C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323839	NM_014258.4(SYCP2):c.3269A>G (p.Lys1090Arg)	SYCP2 (K1090R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323837	NM_014258.4(SYCP2):c.3186G>C (p.Lys1062Asn)	SYCP2 (K1062N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172572	NM_014258.4(SYCP2):c.3161T>G (p.Ile1054Ser)	SYCP2 (I1054S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2552766	NM_014258.4(SYCP2):c.3071A>T (p.Asn1024Ile)	SYCP2 (N1024I)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 633614	NM_014258.4(SYCP2):c.3067_3071del (p.Lys1023fs)	SYCP2 (K1023fs)	Deletion (frameshift variant)	Non-obstructive azoospermia +1 more	GPathogenic/Likely pathogenic
Select item 3172571	NM_014258.4(SYCP2):c.3062C>A (p.Thr1021Lys)	SYCP2 (T1021K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2246917	NM_014258.4(SYCP2):c.3055A>T (p.Thr1019Ser)	SYCP2 (T1019S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 781572	NM_014258.4(SYCP2):c.3023C>T (p.Pro1008Leu)	SYCP2 (P1008L)	Single nucleotide variant (missense variant)	not provided	GBenign
Select item 3172570	NM_014258.4(SYCP2):c.2996T>C (p.Ile999Thr)	SYCP2 (I999T)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 789129	NM_014258.4(SYCP2):c.2885A>G (p.Gln962Arg)	SYCP2 (Q962R)	Single nucleotide variant (missense variant)	not provided	GBenign
Select item 3323836	NM_014258.4(SYCP2):c.2882C>A (p.Pro961Gln)	SYCP2 (P961Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2411163	NM_014258.4(SYCP2):c.2870C>T (p.Pro957Leu)	SYCP2 (P957L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323834	NM_014258.4(SYCP2):c.2866G>A (p.Glu956Lys)	SYCP2 (E956K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 729423	NM_014258.4(SYCP2):c.2852T>C (p.Ile951Thr)	SYCP2 (I951T)	Single nucleotide variant (missense variant)	not provided	GBenign
Select item 2213545	NM_014258.4(SYCP2):c.2848G>A (p.Asp950Asn)	SYCP2 (D950N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2530653	NM_014258.4(SYCP2):c.2806A>G (p.Ser936Gly)	SYCP2 (S936G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 633612	NM_014258.4(SYCP2):c.2793_2797del (p.Lys932fs)	SYCP2 (K932fs)	Deletion (frameshift variant)	Non-obstructive azoospermia +1 more	GPathogenic/Likely pathogenic
Select item 3323845	NM_014258.4(SYCP2):c.2792A>G (p.Lys931Arg)	SYCP2 (K931R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2273210	NM_014258.4(SYCP2):c.2786A>G (p.His929Arg)	SYCP2 (H929R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2549966	NM_014258.4(SYCP2):c.2768A>G (p.Lys923Arg)	SYCP2 (K923R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172569	NM_014258.4(SYCP2):c.2579A>G (p.Asn860Ser)	SYCP2 (N860S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172568	NM_014258.4(SYCP2):c.2465G>A (p.Arg822Lys)	SYCP2 (R822K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2479687	NM_014258.4(SYCP2):c.2461A>G (p.Thr821Ala)	SYCP2 (T821A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 773610	NM_014258.4(SYCP2):c.2452A>G (p.Ile818Val)	SYCP2 (I818V)	Single nucleotide variant (missense variant)	not provided	GBenign
Select item 3172565	NM_014258.4(SYCP2):c.2399T>C (p.Val800Ala)	SYCP2 (V800A)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 2228880	NM_014258.4(SYCP2):c.2377A>G (p.Lys793Glu)	SYCP2 (K793E)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 161672	NM_014258.4(SYCP2):c.2365-8T>C	SYCP2	Single nucleotide variant (intron variant)	Malignant tumor of prostate	GUncertain significance
Select item 2498891	NM_014258.4(SYCP2):c.2312A>C (p.Glu771Ala)	SYCP2 (E771A)	Single nucleotide variant (missense variant)	not provided	GLikely benign
Select item 2652459	NM_014258.4(SYCP2):c.2262C>T (p.Cys754=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2334738	NM_014258.4(SYCP2):c.2262C>G (p.Cys754Trp)	SYCP2 (C754W)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172564	NM_014258.4(SYCP2):c.2239A>G (p.Lys747Glu)	SYCP2 (K747E)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2274290	NM_014258.4(SYCP2):c.2216A>G (p.Tyr739Cys)	SYCP2 (Y739C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2607483	NM_014258.4(SYCP2):c.2215T>C (p.Tyr739His)	SYCP2 (Y739H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172563	NM_014258.4(SYCP2):c.2212A>G (p.Ile738Val)	SYCP2 (I738V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323847	NM_014258.4(SYCP2):c.2050A>G (p.Lys684Glu)	SYCP2 (K684E)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 633613	NM_014258.4(SYCP2):c.2022_2025del (p.Lys674fs)	SYCP2 (K674fs)	Microsatellite (frameshift variant)	Non-obstructive azoospermia +1 more	GPathogenic/Likely pathogenic
Select item 769097	NM_014258.4(SYCP2):c.2016T>C (p.Tyr672=)	SYCP2	Single nucleotide variant (synonymous variant)	not provided	GBenign
Select item 3172562	NM_014258.4(SYCP2):c.1931T>C (p.Ile644Thr)	SYCP2 (I644T)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172561	NM_014258.4(SYCP2):c.1913A>G (p.Asp638Gly)	SYCP2 (D638G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2462549	NM_014258.4(SYCP2):c.1887C>G (p.Asn629Lys)	SYCP2 (N629K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2370651	NM_014258.4(SYCP2):c.1834C>G (p.His612Asp)	SYCP2 (H612D)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2556198	NM_014258.4(SYCP2):c.1792A>T (p.Ile598Leu)	SYCP2 (I598L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2508318	NM_014258.4(SYCP2):c.1781G>T (p.Arg594Ile)	SYCP2 (R594I)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 3323850	NM_014258.4(SYCP2):c.1763C>T (p.Ser588Leu)	SYCP2 (S588L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172560	NM_014258.4(SYCP2):c.1643A>G (p.His548Arg)	SYCP2 (H548R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3256632	NM_014258.4(SYCP2):c.1593_1594del (p.Asn531fs)	SYCP2 (N531fs)	Deletion (frameshift variant)	Oligosynaptic infertility	GLikely pathogenic
Select item 2535705	NM_014258.4(SYCP2):c.1570A>T (p.Ser524Cys)	SYCP2 (S524C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323838	NM_014258.4(SYCP2):c.1446G>A (p.Met482Ile)	SYCP2 (M482I)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2509297	NM_014258.4(SYCP2):c.1439C>T (p.Ala480Val)	SYCP2 (A480V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2473620	NM_014258.4(SYCP2):c.1418G>A (p.Ser473Asn)	SYCP2 (S473N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2280295	NM_014258.4(SYCP2):c.1373A>G (p.Asp458Gly)	SYCP2 (D458G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172559	NM_014258.4(SYCP2):c.1247G>A (p.Ser416Asn)	SYCP2 (S416N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323841	NM_014258.4(SYCP2):c.1228C>T (p.His410Tyr)	SYCP2 (H410Y)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2508493	NM_014258.4(SYCP2):c.1211T>C (p.Val404Ala)	SYCP2 (V404A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3323849	NM_014258.4(SYCP2):c.1189A>G (p.Ile397Val)	SYCP2 (I397V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2270283	NM_014258.4(SYCP2):c.1171A>G (p.Thr391Ala)	SYCP2 (T391A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172558	NM_014258.4(SYCP2):c.1158A>C (p.Lys386Asn)	SYCP2 (K386N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2330195	NM_014258.4(SYCP2):c.1147G>C (p.Val383Leu)	SYCP2 (V383L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2253508	NM_014258.4(SYCP2):c.1123G>A (p.Asp375Asn)	SYCP2 (D375N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2309666	NM_014258.4(SYCP2):c.1065T>G (p.Ile355Met)	SYCP2 (I355M)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2213544	NM_014258.4(SYCP2):c.1037G>A (p.Arg346Lys)	SYCP2 (R346K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3172556	NM_014258.4(SYCP2):c.1012G>A (p.Val338Ile)	SYCP2 (V338I)	Single nucleotide variant (missense variant)	not specified	GUncertain significance

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