U.S. flag

An official website of the United States government

NM_000219.6(KCNE1):c.253G>A (p.Asp85Asn) AND Long QT syndrome 5, acquired, susceptibility to

Germline classification:
risk factor (1 submission)
Last evaluated:
Aug 1, 2006
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000014422.12

Allele description [Variation Report for NM_000219.6(KCNE1):c.253G>A (p.Asp85Asn)]

NM_000219.6(KCNE1):c.253G>A (p.Asp85Asn)

Gene:
KCNE1:potassium voltage-gated channel subfamily E regulatory subunit 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
21q22.12
Genomic location:
Preferred name:
NM_000219.6(KCNE1):c.253G>A (p.Asp85Asn)
HGVS:
  • NC_000021.9:g.34449382C>T
  • NG_009091.1:g.66934G>A
  • NM_000219.6:c.253G>AMANE SELECT
  • NM_001127668.4:c.253G>A
  • NM_001127669.4:c.253G>A
  • NM_001127670.4:c.253G>A
  • NM_001270402.3:c.253G>A
  • NM_001270403.2:c.253G>A
  • NM_001270404.3:c.253G>A
  • NM_001270405.3:c.253G>A
  • NP_000210.2:p.Asp85Asn
  • NP_001121140.1:p.Asp85Asn
  • NP_001121141.1:p.Asp85Asn
  • NP_001121142.1:p.Asp85Asn
  • NP_001121142.1:p.Asp85Asn
  • NP_001257331.1:p.Asp85Asn
  • NP_001257332.1:p.Asp85Asn
  • NP_001257333.1:p.Asp85Asn
  • NP_001257334.1:p.Asp85Asn
  • NP_001257334.1:p.Asp85Asn
  • LRG_290t1:c.253G>A
  • LRG_290:g.66934G>A
  • NC_000021.8:g.35821680C>T
  • NM_000219.3:c.253G>A
  • NM_000219.4:c.253G>A
  • NM_000219.5:c.253G>A
  • NM_001127670.3:c.253G>A
  • NM_001270402.1:c.253G>A
  • NM_001270405.2:c.253G>A
  • P15382:p.Asp85Asn
  • c.253G>A
Protein change:
D85N; ASP85ASN
Links:
UniProtKB: P15382#VAR_008902; OMIM: 176261.0005; dbSNP: rs1805128
NCBI 1000 Genomes Browser:
rs1805128
Molecular consequence:
  • NM_000219.6:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127668.4:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127669.4:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127670.4:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270402.3:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270403.2:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270404.3:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270405.3:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
Functional consequence:
Effect on ion channel function [Functional Epilepsy Nomenclature for Ion Channels: FENICS-0001] - Comment(s)

Condition(s)

Name:
Long QT syndrome 5, acquired, susceptibility to
Identifiers:
MedGen: C3150956

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000034671OMIM
no assertion criteria provided
risk factor
(Aug 1, 2006)
germlineliterature only

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Genetic variations of KCNQ1, KCNH2, SCN5A, KCNE1, and KCNE2 in drug-induced long QT syndrome patients.

Paulussen AD, Gilissen RA, Armstrong M, Doevendans PA, Verhasselt P, Smeets HJ, Schulze-Bahr E, Haverkamp W, Breithardt G, Cohen N, Aerssens J.

J Mol Med (Berl). 2004 Mar;82(3):182-8. Epub 2004 Feb 4.

PubMed [citation]
PMID:
14760488

Exclusion of KCNE1 (IsK) as a candidate gene for Jervell and Lange-Nielsen syndrome.

Tesson F, Donger C, Denjoy I, Berthet M, Bennaceur M, Petit C, Coumel P, Schwarts K, Guicheney P.

J Mol Cell Cardiol. 1996 Sep;28(9):2051-5.

PubMed [citation]
PMID:
8899564
See all PubMed Citations (4)

Details of each submission

From OMIM, SCV000034671.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (4)

Description

Long QT Syndrome 5

In a 71-year-old man and an unrelated 81-year-old female with drug-induced torsade de pointes (quinidine and sotolol, respectively), Paulussen et al. (2004) identified heterozygosity for a 253G-A transition in exon 3 of the KCNE1 gene, previously described by Tesson et al. (1996) as a polymorphism, resulting in an asp85-to-asn (D85N) substitution. Both subjects showed QTc prolongation compared to an electrocardiogram recorded prior to drug exposure (613695). The 85N variant was not found in 32 healthy controls.

In a female patient who had a QTc of 460 ms and suffered cardiac arrest, Westenskow et al. (2004) identified triallelic digenic mutations: homozygosity for D85N in the KCNE1 gene, and heterozygosity for a missense mutation in the KCNH2 gene (152427.0021).

Associations Pending Confirmation

In a study of noise-induced hearing loss susceptibility (NIHL; 613035) in 218 Swedish noise-exposed male workers, Van Laer et al. (2006) genotyped 35 SNPs in 10 candidate genes involved in cell coupling and potassium recycling in the inner ear, and identified the 85N variant of KCNE1 in 5 of 104 noise-susceptible individuals and in none of 114 noise-resistant individuals (p = 0.023). Patch-clamp experiments in Chinese hamster ovary (CHO) cells showed a significant difference in current density and midpoint potential between 85N and wildtype channels. The authors suggested that further studies were necessary before KCNE1 D85N could be designated as a causative SNP.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 22, 2024