U.S. flag

An official website of the United States government

NM_002524.5(NRAS):c.38G>A (p.Gly13Asp) AND Noonan syndrome 6

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 10, 2011
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000022690.27

Allele description [Variation Report for NM_002524.5(NRAS):c.38G>A (p.Gly13Asp)]

NM_002524.5(NRAS):c.38G>A (p.Gly13Asp)

Gene:
NRAS:NRAS proto-oncogene, GTPase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p13.2
Genomic location:
Preferred name:
NM_002524.5(NRAS):c.38G>A (p.Gly13Asp)
HGVS:
  • NC_000001.11:g.114716123C>T
  • NG_007572.1:g.5772G>A
  • NM_002524.5:c.38G>AMANE SELECT
  • NP_002515.1:p.Gly13Asp
  • LRG_92t1:c.38G>A
  • LRG_92:g.5772G>A
  • LRG_92p1:p.Gly13Asp
  • NC_000001.10:g.115258744C>T
  • NM_002524.2:c.38G>A
  • NM_002524.3:c.38G>A
  • NM_002524.4:c.38G>A
  • P01111:p.Gly13Asp
Protein change:
G13D; GLY13ASP
Links:
UniProtKB: P01111#VAR_063084; OMIM: 164790.0003; dbSNP: rs121434596
NCBI 1000 Genomes Browser:
rs121434596
Molecular consequence:
  • NM_002524.5:c.38G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Noonan syndrome 6 (NS6)
Synonyms:
NRAS gene related Noonan syndrome
Identifiers:
MONDO: MONDO:0013186; MedGen: C2750732; Orphanet: 648; OMIM: 613224

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000043979OMIM
no assertion criteria provided
Pathogenic
(Mar 10, 2011)
unknownliterature only

PubMed (6)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownnot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Spontaneous improvement of hematologic abnormalities in patients having juvenile myelomonocytic leukemia with specific RAS mutations.

Matsuda K, Shimada A, Yoshida N, Ogawa A, Watanabe A, Yajima S, Iizuka S, Koike K, Yanai F, Kawasaki K, Yanagimachi M, Kikuchi A, Ohtsuka Y, Hidaka E, Yamauchi K, Tanaka M, Yanagisawa R, Nakazawa Y, Shiohara M, Manabe A, Kojima S, Koike K.

Blood. 2007 Jun 15;109(12):5477-80. Epub 2007 Mar 1.

PubMed [citation]
PMID:
17332249

NRAS mutation causes a human autoimmune lymphoproliferative syndrome.

Oliveira JB, Bidère N, Niemela JE, Zheng L, Sakai K, Nix CP, Danner RL, Barb J, Munson PJ, Puck JM, Dale J, Straus SE, Fleisher TA, Lenardo MJ.

Proc Natl Acad Sci U S A. 2007 May 22;104(21):8953-8. Epub 2007 May 16.

PubMed [citation]
PMID:
17517660
PMCID:
PMC1885609
See all PubMed Citations (6)

Details of each submission

From OMIM, SCV000043979.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (6)

Description

In white blood cells derived from 2 unrelated children with juvenile myelomonocytic leukemia (JMML; 607785), Matsuda et al. (2007) identified a somatic heterozygous G-to-A transition in the NRAS gene, resulting in a gly13-to-asp (G13D) substitution.

Oliveira et al. (2007) identified a heterozygous G-to-A transition in the NRAS gene, resulting in a gly13-to-asp (G13D) substitution, in a 49-year-old patient with RAS-associated autoimmune leukoproliferative disorder (RALD; 614470). The patient had a lifelong overexpansion of lymphocytes and a history of childhood leukemia, and early adulthood lymphoma, both successfully treated. There were no developmental defects. Laboratory studies showed increased serum alpha/beta CD4-/CD8- T cells and lymph node follicular hyperplasia. There was no evidence of CD95 (134637)-mediated apoptosis, but the patient's lymphocytes resisted death by IL2 (147680) withdrawal, indicating a specific defect in lymphocyte apoptosis. Further studies of the patient's cells indicated a decrease of the proapoptotic protein BIM (BCL2L11; 603827), which is critical for withdrawal-induced mitochondrial apoptosis. The mutation was found in the patient's lymphoblasts, peripheral blood mononuclear cells, monocytes, EBV-transformed B cells, and buccal epithelial cells. It was not present in the patient's unaffected relatives, suggesting de novo occurrence. The patient had no developmental abnormalities or features of Noonan syndrome. Oliveira et al. (2007) noted that the same mutation had been identified somatically in myeloid and lymphoid malignancies (Bos et al., 1985; Lubbert et al., 1990). Niemela et al. (2010) stated that the NRAS mutation found by Oliveira et al. (2007) was a somatic mutation.

De Filippi et al. (2009) identified a de novo germline heterozygous G13D substitution in the NRAS gene in a male infant who presented at age 2 months with juvenile myelomonocytic leukemia (JMML; 607785) and was later noted to have dysmorphic features suggestive of, but not diagnostic of, Noonan syndrome (NS6; 613224). Features included short stature, relative macrocephaly, high forehead, epicanthal folds, long eyebrows, low nasal bridge, low-set ears, 2 cafe-au-lait spots, and low scores on performance tasks. Cardiac studies were normal. There were no hematologic abnormalities related to RALD in this patient.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 26, 2024