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NM_004208.4(AIFM1):c.434C>T (p.Ala145Val) AND Deafness, X-linked 5

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000149858.1

Allele description [Variation Report for NM_004208.4(AIFM1):c.434C>T (p.Ala145Val)]

NM_004208.4(AIFM1):c.434C>T (p.Ala145Val)

Genes:
RAB33A:RAB33A, member RAS oncogene family [Gene - OMIM - HGNC]
AIFM1:apoptosis inducing factor mitochondria associated 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq26.1
Genomic location:
Preferred name:
NM_004208.4(AIFM1):c.434C>T (p.Ala145Val)
HGVS:
  • NC_000023.11:g.130147792G>A
  • NG_013217.1:g.23042C>T
  • NM_001130847.4:c.434C>T
  • NM_004208.4:c.434C>TMANE SELECT
  • NM_145812.3:c.422C>T
  • NP_001124319.1:p.Ala145Val
  • NP_004199.1:p.Ala145Val
  • NP_665811.1:p.Ala141Val
  • NC_000023.10:g.129281767G>A
  • NM_004208.3:c.434C>T
  • NR_132647.2:n.476C>T
Protein change:
A141V
Links:
dbSNP: rs724160015
NCBI 1000 Genomes Browser:
rs724160015
Molecular consequence:
  • NM_001130847.4:c.434C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004208.4:c.434C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_145812.3:c.422C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_132647.2:n.476C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
2

Condition(s)

Name:
Deafness, X-linked 5 (DFNX5)
Synonyms:
AUDITORY NEUROPATHY, X-LINKED, 1, WITH PERIPHERAL SENSORY NEUROPATHY; DEAFNESS, X-LINKED 5, WITH PERIPHERAL NEUROPATHY
Identifiers:
MedGen: C1845095; Orphanet: 139583; OMIM: 300614

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000196712Deafness Gene Diagnosis, Xijing Hospital
no assertion criteria provided
Likely pathogenicunknownclinical testing

Description

missense mutation in conserved position, not detected in normal control (118 people), and Mutationtaster predicted as Disease Causing

SCV000196712

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes2not providednot provided183noclinical testing

Details of each submission

From Deafness Gene Diagnosis, Xijing Hospital, SCV000196712.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednoclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyes183bloodnot provided2not providednot providednot provided

Last Updated: Aug 5, 2023