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NM_000447.3(PSEN2):c.211C>T (p.Arg71Trp) AND not specified

Germline classification:
Likely benign (1 submission)
Last evaluated:
Jun 24, 2013
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000172587.5

Allele description [Variation Report for NM_000447.3(PSEN2):c.211C>T (p.Arg71Trp)]

NM_000447.3(PSEN2):c.211C>T (p.Arg71Trp)

Gene:
PSEN2:presenilin 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q42.13
Genomic location:
Preferred name:
NM_000447.3(PSEN2):c.211C>T (p.Arg71Trp)
HGVS:
  • NC_000001.11:g.226883774C>T
  • NG_007381.2:g.18591C>T
  • NM_000447.3:c.211C>TMANE SELECT
  • NM_012486.3:c.211C>T
  • NP_000438.2:p.Arg71Trp
  • NP_036618.2:p.Arg71Trp
  • LRG_225t1:c.211C>T
  • LRG_225:g.18591C>T
  • LRG_225p1:p.Arg71Trp
  • NC_000001.10:g.227071475C>T
  • NG_007381.1:g.18203C>T
  • NM_000447.2:c.211C>T
  • P49810:p.Arg71Trp
Protein change:
R71W
Links:
UniProtKB: P49810#VAR_070027; dbSNP: rs140501902
NCBI 1000 Genomes Browser:
rs140501902
Molecular consequence:
  • NM_000447.3:c.211C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_012486.3:c.211C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000051420Biesecker Lab/Clinical Genomics Section, National Institutes of Health - ClinSeq
criteria provided, single submitter

(Ng et al. (Circ Cardiovasc Genet. 2013))
Likely benign
(Jun 24, 2013)
unknownresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknown4not providednot providednot providednot providedresearch

Citations

PubMed

Interpreting secondary cardiac disease variants in an exome cohort.

Ng D, Johnston JJ, Teer JK, Singh LN, Peller LC, Wynter JS, Lewis KL, Cooper DN, Stenson PD, Mullikin JC, Biesecker LG; NIH Intramural Sequencing Center (NISC) Comparative Sequencing Program..

Circ Cardiovasc Genet. 2013 Aug;6(4):337-46. doi: 10.1161/CIRCGENETICS.113.000039. Epub 2013 Jul 16.

PubMed [citation]
PMID:
23861362
PMCID:
PMC3887521

Details of each submission

From Biesecker Lab/Clinical Genomics Section, National Institutes of Health - ClinSeq, SCV000051420.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided4not providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot provided4not providednot providednot provided

Last Updated: Sep 29, 2024