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GRCh37/hg19 1p31.1(chr1:72578280-77429541)x3 AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Oct 31, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000585144.3

Allele description [Variation Report for GRCh37/hg19 1p31.1(chr1:72578280-77429541)x3]

GRCh37/hg19 1p31.1(chr1:72578280-77429541)x3

Genes:
  • FPGT-TNNI3K:FPGT-TNNI3K readthrough [Gene - HGNC]
  • LHX8:LIM homeobox 8 [Gene - OMIM - HGNC]
  • RABGGTB:Rab geranylgeranyltransferase subunit beta [Gene - OMIM - HGNC]
  • ST6GALNAC3:ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Gene - OMIM - HGNC]
  • ST6GALNAC5:ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Gene - OMIM - HGNC]
  • TNNI3K:TNNI3 interacting kinase [Gene - OMIM - HGNC]
  • ACADM:acyl-CoA dehydrogenase medium chain [Gene - OMIM - HGNC]
  • ASB17:ankyrin repeat and SOCS box containing 17 [Gene - OMIM - HGNC]
  • CRYZ:crystallin zeta [Gene - OMIM - HGNC]
  • FPGT:fucose-1-phosphate guanylyltransferase [Gene - OMIM - HGNC]
  • ERICH3:glutamate rich 3 [Gene - HGNC]
  • LRRIQ3:leucine rich repeats and IQ motif containing 3 [Gene - OMIM - HGNC]
  • MSH4:mutS homolog 4 [Gene - OMIM - HGNC]
  • NEGR1:neuronal growth regulator 1 [Gene - OMIM - HGNC]
  • SLC44A5:solute carrier family 44 member 5 [Gene - HGNC]
  • TYW3:tRNA-yW synthesizing protein 3 homolog [Gene - OMIM - HGNC]
Variant type:
copy number gain
Cytogenetic location:
1p31.1
Genomic location:
Chr1: 72578280 - 77429541 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 1p31.1(chr1:72578280-77429541)x3
HGVS:
    Observations:
    1

    Condition(s)

    Synonyms:
    none provided
    Identifiers:
    MedGen: CN517202

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    Assertion and evidence details

    Submission AccessionSubmitterReview Status
    (Assertion method)
    Clinical Significance
    (Last evaluated)
    OriginMethodCitations
    SCV000693382CeGaT Center for Human Genetics Tuebingen
    criteria provided, single submitter

    (Praxis fuer Humangenetik Tuebingen - Variant Classification Criteria)
    Uncertain significance
    (Oct 31, 2017)
    germlineclinical testing

    Citation Link

    Summary from all submissions

    EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
    not providedgermlineyes1not providednot providednot providednot providedclinical testing

    Details of each submission

    From CeGaT Center for Human Genetics Tuebingen, SCV000693382.4

    #EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
    1not provided1not providednot providedclinical testingnot provided
    #SampleMethodObservation
    OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
    1germlineyesnot providednot providednot provided1not providednot providednot provided

    Last Updated: Dec 24, 2022