NM_001032283.3(TMPO):c.565+1665A>G AND Dilated cardiomyopathy 1T

Germline classification:: Benign (2 submissions)
Last evaluated:: Aug 22, 2016
Review status:: 2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000625187.10

Allele description [Variation Report for NM_001032283.3(TMPO):c.565+1665A>G]

NM_001032283.3(TMPO):c.565+1665A>G

Gene:

TMPO:thymopoietin [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

12q23.1

Genomic location:

Preferred name:

NM_001032283.3(TMPO):c.565+1665A>G

Other names:

p.K416E:AAG>GAG

HGVS:

NC_000012.12:g.98533503A>G
NG_021393.1:g.22931A>G
NM_001032283.3:c.565+1665A>GMANE SELECT
NM_001032284.3:c.565+1665A>G
NM_001307975.2:c.565+1665A>G
NM_003276.2:c.1246A>G
NP_003267.1:p.Lys416Glu
LRG_443t2:c.1246A>G
LRG_443:g.22931A>G
LRG_443p2:p.Lys416Glu
NC_000012.11:g.98927281A>G
P42166:p.Lys416Glu
c.1246A>G

Protein change:

K416E

Links:

UniProtKB: P42166#VAR_049776; dbSNP: rs11838270

NCBI 1000 Genomes Browser:

rs11838270

Molecular consequence:

NM_001032283.3:c.565+1665A>G - intron variant - [Sequence Ontology: SO:0001627]
NM_001032284.3:c.565+1665A>G - intron variant - [Sequence Ontology: SO:0001627]
NM_001307975.2:c.565+1665A>G - intron variant - [Sequence Ontology: SO:0001627]
NM_003276.2:c.1246A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Dilated cardiomyopathy 1T
Identifiers:: MedGen: C3151039; Orphanet: 154

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000744067	Genome Diagnostics Laboratory, University Medical Center Utrecht - VKGL Data-share Consensus	criteria provided, single submitter (ACGS Guidelines, 2013)	Benign (Aug 22, 2016)	germline	clinical testing	Citation Link,
SCV000745516	Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus	criteria provided, single submitter (ACGS Guidelines, 2013)	Benign (Sep 21, 2015)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000744067

Genome Diagnostics Laboratory, University Medical Center Utrecht - VKGL Data-share Consensus

criteria provided, single submitter

(ACGS Guidelines, 2013)

Benign
(Aug 22, 2016)

germline

clinical testing

Citation Link,

SCV000745516

Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus

criteria provided, single submitter

(ACGS Guidelines, 2013)

Benign
(Sep 21, 2015)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Genome Diagnostics Laboratory, University Medical Center Utrecht - VKGL Data-share Consensus, SCV000744067.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

From Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus, SCV000745516.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 10, 2024

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