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NM_000465.4(BARD1):c.841C>T (p.Pro281Ser) AND not provided

Germline classification:
Uncertain significance (3 submissions)
Last evaluated:
Feb 5, 2024
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000656771.13

Allele description [Variation Report for NM_000465.4(BARD1):c.841C>T (p.Pro281Ser)]

NM_000465.4(BARD1):c.841C>T (p.Pro281Ser)

Gene:
BARD1:BRCA1 associated RING domain 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q35
Genomic location:
Preferred name:
NM_000465.4(BARD1):c.841C>T (p.Pro281Ser)
Other names:
p.P281S:CCA>TCA
HGVS:
  • NC_000002.12:g.214781033G>A
  • NG_012047.3:g.33679C>T
  • NM_000465.4:c.841C>TMANE SELECT
  • NM_001282543.2:c.784C>T
  • NM_001282545.2:c.215+16028C>T
  • NM_001282548.2:c.158+28379C>T
  • NM_001282549.2:c.364+11264C>T
  • NP_000456.2:p.Pro281Ser
  • NP_001269472.1:p.Pro262Ser
  • LRG_297t1:c.841C>T
  • LRG_297:g.33679C>T
  • LRG_297p1:p.Pro281Ser
  • NC_000002.11:g.215645757G>A
  • NG_012047.2:g.33672C>T
  • NM_000465.2:c.841C>T
  • NM_000465.3:c.841C>T
  • NR_104212.2:n.806C>T
  • NR_104215.2:n.749C>T
Protein change:
P262S
Links:
dbSNP: rs200059956
NCBI 1000 Genomes Browser:
rs200059956
Molecular consequence:
  • NM_001282545.2:c.215+16028C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001282548.2:c.158+28379C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001282549.2:c.364+11264C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000465.4:c.841C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282543.2:c.784C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_104212.2:n.806C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_104215.2:n.749C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000149554GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)
Uncertain significance
(Feb 5, 2024)
germlineclinical testing

Citation Link,

SCV000600209Quest Diagnostics Nichols Institute San Juan Capistrano
criteria provided, single submitter

(Quest Diagnostics criteria)
Uncertain significance
(May 22, 2020)
unknownclinical testing

PubMed (4)
[See all records that cite these PMIDs]

SCV000806135PreventionGenetics, part of Exact Sciences
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Oct 30, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Nothing to display

See all PubMed Citations (5)

Details of each submission

From GeneDx, SCV000149554.18

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Observed in individuals with a personal or family history including breast, colon, or other cancer and/or polyps, and also observed in unaffected controls (PMID: 25980754, 26976419, 27978560, 33471991, 34250417, 33606809, 35534704, 35264596); In silico analysis supports that this missense variant does not alter protein structure/function; Not observed at significant frequency in large population cohorts (gnomAD); This variant is associated with the following publications: (PMID: 25980754, 26976419, 27720647, 27978560, 29596542, 33606809, 33471991, 35264596, 35534704, 34250417)

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Quest Diagnostics Nichols Institute San Juan Capistrano, SCV000600209.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (4)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

From PreventionGenetics, part of Exact Sciences, SCV000806135.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024