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NM_006009.4(TUBA1A):c.652G>A (p.Asp218Asn) AND multiple conditions

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Feb 18, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000779653.1

Allele description [Variation Report for NM_006009.4(TUBA1A):c.652G>A (p.Asp218Asn)]

NM_006009.4(TUBA1A):c.652G>A (p.Asp218Asn)

Gene:
TUBA1A:tubulin alpha 1a [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q13.12
Genomic location:
Preferred name:
NM_006009.4(TUBA1A):c.652G>A (p.Asp218Asn)
HGVS:
  • NC_000012.12:g.49185714C>T
  • NG_008966.1:g.8365G>A
  • NM_001270399.2:c.652G>A
  • NM_001270400.2:c.547G>A
  • NM_006009.4:c.652G>AMANE SELECT
  • NP_001257328.1:p.Asp218Asn
  • NP_001257328.1:p.Asp218Asn
  • NP_001257329.1:p.Asp183Asn
  • NP_006000.2:p.Asp218Asn
  • NC_000012.11:g.49579497C>T
  • NM_001270399.1:c.652G>A
  • NM_006009.2:c.652G>A
  • NM_006009.3:c.652G>A
Protein change:
D183N
Links:
dbSNP: rs1057517858
NCBI 1000 Genomes Browser:
rs1057517858
Molecular consequence:
  • NM_001270399.2:c.652G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270400.2:c.547G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_006009.4:c.652G>A - missense variant - [Sequence Ontology: SO:0001583]
Functional consequence:
dominant_negative_variant [Sequence Ontology: SO:0002052]

Condition(s)

Name:
Lissencephaly due to TUBA1A mutation (LIS3)
Synonyms:
Lissencephaly 3
Identifiers:
MONDO: MONDO:0012703; MedGen: C4305153; Orphanet: 171680; OMIM: 611603
Name:
Corpus callosum, agenesis of
Synonyms:
Corpus callosum agenesis; Mental retardation hypoplastic corpus callosum preauricular tag; Da silva syndrome; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009022; MedGen: C0175754; Orphanet: 200; OMIM: 217990; Human Phenotype Ontology: HP:0001274
Name:
Genetic syndrome with a Dandy-Walker malformation as major feature
Identifiers:
MedGen: CN274613

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000916332Dobyns Lab, Seattle Children's Research Institute
no assertion criteria provided
Pathogenic
(Feb 18, 2019)
germlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Caucasiangermlineyes1not providednot providednot providednot providedresearch

Details of each submission

From Dobyns Lab, Seattle Children's Research Institute, SCV000916332.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Caucasian1not providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Oct 8, 2024