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NM_000235.4(LIPA):c.76C>T (p.Leu26=) AND Lysosomal acid lipase deficiency

Germline classification:
Likely benign (1 submission)
Last evaluated:
Sep 24, 2021
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001826258.2

Allele description [Variation Report for NM_000235.4(LIPA):c.76C>T (p.Leu26=)]

NM_000235.4(LIPA):c.76C>T (p.Leu26=)

Gene:
LIPA:lipase A, lysosomal acid type [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q23.31
Genomic location:
Preferred name:
NM_000235.4(LIPA):c.76C>T (p.Leu26=)
HGVS:
  • NC_000010.11:g.89247573G>A
  • NG_008194.1:g.9331C>T
  • NM_000235.4:c.76C>TMANE SELECT
  • NM_001127605.3:c.76C>T
  • NM_001288979.2:c.-120+4164C>T
  • NP_000226.2:p.Leu26=
  • NP_001121077.1:p.Leu26=
  • NC_000010.10:g.91007330G>A
  • NM_000235.2:c.76C>T
Links:
dbSNP: rs377437637
NCBI 1000 Genomes Browser:
rs377437637
Molecular consequence:
  • NM_001288979.2:c.-120+4164C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000235.4:c.76C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001127605.3:c.76C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Lysosomal acid lipase deficiency
Synonyms:
Acid cholesteryl ester hydrolase deficiency, type 2
Identifiers:
MONDO: MONDO:0800449; MedGen: C5574740; OMIM: PS278000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002091510Natera, Inc.
no assertion criteria provided
Likely benign
(Sep 24, 2021)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002091510.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024