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NM_000070.3(CAPN3):c.46G>A (p.Glu16Lys) AND Autosomal recessive limb-girdle muscular dystrophy type 2A

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Oct 28, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001835820.1

Allele description [Variation Report for NM_000070.3(CAPN3):c.46G>A (p.Glu16Lys)]

NM_000070.3(CAPN3):c.46G>A (p.Glu16Lys)

Gene:
CAPN3:calpain 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q15.1
Genomic location:
Preferred name:
NM_000070.3(CAPN3):c.46G>A (p.Glu16Lys)
HGVS:
  • NC_000015.10:g.42359851G>A
  • NG_008660.1:g.16749G>A
  • NM_000070.3:c.46G>AMANE SELECT
  • NM_024344.2:c.46G>A
  • NM_173087.2:c.46G>A
  • NP_000061.1:p.Glu16Lys
  • NP_077320.1:p.Glu16Lys
  • NP_775110.1:p.Glu16Lys
  • LRG_849t1:c.46G>A
  • LRG_849:g.16749G>A
  • LRG_849p1:p.Glu16Lys
  • NC_000015.9:g.42652049G>A
  • NM_000070.2:c.46G>A
Protein change:
E16K
Links:
dbSNP: rs772580081
NCBI 1000 Genomes Browser:
rs772580081
Molecular consequence:
  • NM_000070.3:c.46G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_024344.2:c.46G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_173087.2:c.46G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Autosomal recessive limb-girdle muscular dystrophy type 2A (LGMDR1)
Synonyms:
Limb-girdle muscular dystrophy, type 2A; Limb-girdle muscular dystrophy type 2; Muscular dystrophy, pelvofemoral; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009675; MedGen: C1869123; Orphanet: 267; OMIM: 253600

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002094425Natera, Inc.
no assertion criteria provided
Uncertain significance
(Oct 28, 2019)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002094425.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Aug 11, 2024