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NM_005909.5(MAP1B):c.4195C>T (p.Arg1399Cys) AND Periventricular nodular heterotopia 9

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 29, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001839212.1

Allele description [Variation Report for NM_005909.5(MAP1B):c.4195C>T (p.Arg1399Cys)]

NM_005909.5(MAP1B):c.4195C>T (p.Arg1399Cys)

Gene:
MAP1B:microtubule associated protein 1B [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
5q13.2
Genomic location:
Preferred name:
NM_005909.5(MAP1B):c.4195C>T (p.Arg1399Cys)
HGVS:
  • NC_000005.10:g.72197550C>T
  • NM_001324255.2:c.3817C>T
  • NM_005909.5:c.4195C>TMANE SELECT
  • NP_001311184.1:p.Arg1273Cys
  • NP_005900.2:p.Arg1399Cys
  • NC_000005.9:g.71493377C>T
Protein change:
R1273C
Links:
dbSNP: rs776226079
NCBI 1000 Genomes Browser:
rs776226079
Molecular consequence:
  • NM_001324255.2:c.3817C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005909.5:c.4195C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Periventricular nodular heterotopia 9
Identifiers:
MONDO: MONDO:0030061; MedGen: C5394503; OMIM: 618918

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002099161New York Genome Center - CSER-NYCKidSeq
criteria provided, single submitter

(NYGC Assertion Criteria 2020)
Uncertain significance
(Apr 29, 2021)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From New York Genome Center - CSER-NYCKidSeq, SCV002099161.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Dec 24, 2023