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NM_000335.5(SCN5A):c.5790G>A (p.Gln1930=) AND Cardiac arrhythmia

Germline classification:
Likely benign (1 submission)
Last evaluated:
Nov 30, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001843114.10

Allele description [Variation Report for NM_000335.5(SCN5A):c.5790G>A (p.Gln1930=)]

NM_000335.5(SCN5A):c.5790G>A (p.Gln1930=)

Gene:
SCN5A:sodium voltage-gated channel alpha subunit 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p22.2
Genomic location:
Preferred name:
NM_000335.5(SCN5A):c.5790G>A (p.Gln1930=)
HGVS:
  • NC_000003.12:g.38550579C>T
  • NG_008934.1:g.104094G>A
  • NM_000335.5:c.5790G>AMANE SELECT
  • NM_001099404.2:c.5793G>A
  • NM_001099405.2:c.5739G>A
  • NM_001160160.2:c.5694G>A
  • NM_001160161.2:c.5631G>A
  • NM_001354701.2:c.5736G>A
  • NM_198056.3:c.5793G>A
  • NP_000326.2:p.Gln1930=
  • NP_001092874.1:p.Gln1931=
  • NP_001092875.1:p.Gln1913=
  • NP_001153632.1:p.Gln1898=
  • NP_001153633.1:p.Gln1877=
  • NP_001341630.1:p.Gln1912=
  • NP_932173.1:p.Gln1931=
  • LRG_289t1:c.5793G>A
  • LRG_289:g.104094G>A
  • NC_000003.11:g.38592070C>T
  • NM_198056.2:c.5793G>A
Links:
dbSNP: rs2061012191
NCBI 1000 Genomes Browser:
rs2061012191
Molecular consequence:
  • NM_000335.5:c.5790G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001099404.2:c.5793G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001099405.2:c.5739G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001160160.2:c.5694G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001160161.2:c.5631G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001354701.2:c.5736G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_198056.3:c.5793G>A - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Cardiac arrhythmia
Synonyms:
Cardiac rhythm disease
Identifiers:
EFO: EFO_0004269; MONDO: MONDO:0007263; MedGen: C0003811; Human Phenotype Ontology: HP:0011675

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001347465Color Diagnostics, LLC DBA Color Health
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely benign
(Nov 30, 2018)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Nothing to display

Details of each submission

From Color Diagnostics, LLC DBA Color Health, SCV001347465.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 18, 2024