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NM_022725.4(FANCF):c.1A>C (p.Met1Leu) AND Fanconi anemia

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
May 27, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002255797.2

Allele description [Variation Report for NM_022725.4(FANCF):c.1A>C (p.Met1Leu)]

NM_022725.4(FANCF):c.1A>C (p.Met1Leu)

Gene:
FANCF:FA complementation group F [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11p14.3
Genomic location:
Preferred name:
NM_022725.4(FANCF):c.1A>C (p.Met1Leu)
HGVS:
  • NC_000011.10:g.22625810T>G
  • NG_007425.1:g.5032A>C
  • NM_022725.4:c.1A>CMANE SELECT
  • NP_073562.1:p.Met1Leu
  • LRG_527t1:c.1A>C
  • LRG_527:g.5032A>C
  • NC_000011.9:g.22647356T>G
  • NM_022725.3:c.1A>C
Protein change:
M1L
Links:
dbSNP: rs1046564488
NCBI 1000 Genomes Browser:
rs1046564488
Molecular consequence:
  • NM_022725.4:c.1A>C - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_022725.4:c.1A>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Fanconi anemia (FA)
Synonyms:
Fanconi pancytopenia; Fanconi's anemia
Identifiers:
MONDO: MONDO:0019391; MeSH: D005199; MedGen: C0015625; Orphanet: 84; OMIM: PS227650

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002527982Sema4, Sema4
criteria provided, single submitter

(Sema4 Curation Guidelines)
Likely pathogenic
(May 27, 2021)
germlinecuration

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedcuration

Details of each submission

From Sema4, Sema4, SCV002527982.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcurationnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 7, 2024