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NM_004004.6(GJB2):c.355GAG[1] (p.Glu120del) AND multiple conditions

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 26, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002496401.3

Allele description [Variation Report for NM_004004.6(GJB2):c.355GAG[1] (p.Glu120del)]

NM_004004.6(GJB2):c.355GAG[1] (p.Glu120del)

Gene:
GJB2:gap junction protein beta 2 [Gene - OMIM - HGNC]
Variant type:
Microsatellite
Cytogenetic location:
13q12.11
Genomic location:
Preferred name:
NM_004004.6(GJB2):c.355GAG[1] (p.Glu120del)
Other names:
E118del; E120delE
HGVS:
  • NC_000013.10:g.20763361_20763363del
  • NC_000013.11:g.20189222CTC[1]
  • NG_008358.1:g.8749GAG[1]
  • NM_004004.6:c.355GAG[1]MANE SELECT
  • NM_004004.6:c.358_360delGAG
  • NP_003995.2:p.Glu120del
  • LRG_1350t1:c.355GAG[1]
  • LRG_1350:g.8749GAG[1]
  • LRG_1350p1:p.Glu120del
  • NC_000013.10:g.20763361CTC[1]
  • NC_000013.10:g.20763361_20763363del
  • NC_000013.10:g.20763361_20763363delCTC
  • NC_000013.11:g.20189222_20189224delCTC
  • NM_004004.5:c.358_360delGAG
  • NM_004004.6:c.355GAG[1]
  • NM_004004.6:c.358_360delMANE SELECT
  • NM_004004.6:c.358_360delGAGMANE SELECT
  • c.358_360delGAG
  • c.358_360delGAG (p.Glu120del)
Protein change:
E120del; GLU118DEL
Links:
OMIM: 121011.0007; dbSNP: rs80338947
NCBI 1000 Genomes Browser:
rs80338947
Molecular consequence:
  • NM_004004.6:c.355GAG[1] - inframe_deletion - [Sequence Ontology: SO:0001822]

Condition(s)

Name:
Autosomal recessive nonsyndromic hearing loss 1A (DFNB1A)
Synonyms:
Deafness nonsyndromic, Connexin 26 linked; Deafness, autosomal recessive 1A; DFNB 1 Nonsyndromic Hearing Loss and Deafness; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009076; MedGen: C2673759; Orphanet: 90636; OMIM: 220290
Name:
Mutilating keratoderma (VOWNKL)
Synonyms:
Deafness, congenital, with keratopachydermia and constrictions of fingers and toes; Keratoderma hereditarium mutilans
Identifiers:
MONDO: MONDO:0007422; MedGen: C0265964; Orphanet: 494; OMIM: 124500
Name:
Ichthyosis, hystrix-like, with hearing loss
Synonyms:
HID SYNDROME; Hystrix-like ichthyosis with deafness
Identifiers:
MONDO: MONDO:0011245; MedGen: C1865234; Orphanet: 477; OMIM: 602540
Name:
Autosomal dominant keratitis-ichthyosis-hearing loss syndrome
Synonyms:
Keratitis-ichthyosis-deafness syndrome, autosomal dominant; KID syndrome, autosomal dominant; Senter syndrome
Identifiers:
MONDO: MONDO:0007850; MedGen: C0265336; Orphanet: 477; OMIM: 148210
Name:
Palmoplantar keratoderma-deafness syndrome
Synonyms:
Keratoderma palmoplantar deafness; Keratoderma palmoplantar, with deafness; Palmoplantar keratoderma and sensorineural deafness; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007852; MedGen: C1835672; Orphanet: 2202; OMIM: 148350
Name:
Knuckle pads, deafness AND leukonychia syndrome
Synonyms:
Knuckle pads, leuconychia and sensorineural deafness; Bart-Pumphrey syndrome
Identifiers:
MONDO: MONDO:0007866; MedGen: C0266004; Orphanet: 2698; OMIM: 149200
Name:
Autosomal dominant nonsyndromic hearing loss 3A
Synonyms:
Deafness, autosomal dominant 3a
Identifiers:
MONDO: MONDO:0011103; MedGen: C2675750; Orphanet: 90635; OMIM: 601544
Name:
X-linked mixed hearing loss with perilymphatic gusher
Synonyms:
Deafness, X-linked 2; Deafness conductive with stapes fixation; Deafness 3 conductive with stapes fixation; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010576; MedGen: C1844678; Orphanet: 383; OMIM: 304400

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002810521Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Pathogenic
(Mar 26, 2022) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002810521.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 20, 2024