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NM_001122659.3(EDNRB):c.552T>C (p.Ser184=) AND multiple conditions

Germline classification:
Benign (1 submission)
Last evaluated:
Oct 25, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002503839.1

Allele description [Variation Report for NM_001122659.3(EDNRB):c.552T>C (p.Ser184=)]

NM_001122659.3(EDNRB):c.552T>C (p.Ser184=)

Genes:
EDNRB-AS1:EDNRB antisense RNA 1 [Gene - HGNC]
EDNRB:endothelin receptor type B [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
13q22.3
Genomic location:
Preferred name:
NM_001122659.3(EDNRB):c.552T>C (p.Ser184=)
HGVS:
  • NC_000013.11:g.77903539A>G
  • NG_011630.3:g.76185T>C
  • NM_000115.5:c.552T>C
  • NM_001122659.3:c.552T>CMANE SELECT
  • NM_001201397.2:c.822T>C
  • NM_003991.4:c.552T>C
  • NP_000106.1:p.Ser184=
  • NP_001116131.1:p.Ser184=
  • NP_001188326.1:p.Ser274=
  • NP_001188326.1:p.Ser274=
  • NP_003982.1:p.Ser184=
  • NC_000013.10:g.78477674A>G
  • NM_000115.5:c.552T>C
  • NM_001201397.1:c.822=
  • p.Ser274Ser
Links:
dbSNP: rs5348
NCBI 1000 Genomes Browser:
rs5348
Molecular consequence:
  • NM_000115.5:c.552T>C - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001122659.3:c.552T>C - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001201397.2:c.822T>C - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_003991.4:c.552T>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
ABCD syndrome (ABCDS)
Synonyms:
Albinism, Black lock, Cell migration disorder of the neurocytes of the gut and Deafness
Identifiers:
MONDO: MONDO:0010895; MedGen: C1838099; OMIM: 600501
Name:
Hirschsprung disease, susceptibility to, 2
Synonyms:
Hirschsprung disease 2
Identifiers:
MONDO: MONDO:0010833; MedGen: C1838564; Orphanet: 388; OMIM: 600155
Name:
Waardenburg syndrome type 4A (WS4A)
Synonyms:
WAARDENBURG SYNDROME WITH HIRSCHSPRUNG DISEASE, TYPE 4A; Hirschsprung disease with pigmentary anomaly
Identifiers:
MONDO: MONDO:0010192; MedGen: C1848519; Orphanet: 897; OMIM: 277580

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002807974Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Benign
(Oct 25, 2021) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002807974.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024